| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616638
Identifier: 239616638
GI number: 239616638
Start: 259202
End: 260482
Strand: Direct
Name: 239616638
Synonym: Kole_0231
Alternate gene names: NA
Gene position: 259202-260482 (Clockwise)
Preceding gene: 239616637
Following gene: 239616641
Centisome position: 11.26
GC content: 39.5
Gene sequence:
>1281_bases ATGGAATTGTTTGATATCCTGTTATCGATGAATCTCTGGTGGCGGGGTACTAAGATAGAAGTTCCTGAAATAAAAAGAGA TACTTACGATGAAGTTCAAGAACTTTATAACACTTCTAAAACCATGATTTGCATTCAGGGATTGAGAAGGGTTGGAAAAT CTACGTTGATCTTTCAGTTCATAAATGAACTCCTTACAAATGGGGCGGACCCGGAGGATATTTTATACATCTCCTTAGAT GATCCAAGACTTATCAGTTTTGATTTTCCGATAATCGAAGCTTATGAACTATGGTTAAAAAGGTTCGGTAGAAGAAAGGC ATACCTTTTCGTGGATGAAGCTCATTTTTCCAGAAACTTCGATCTTCAGTTAAAAAGAATCTACGACAACTATGGTCCGA AGATCGTATTCACAGGTTCCGCATCCCTTTTCTTAAAGAAAGGGATATCCGAAAGCCTTGCAGGCCGGGTTATCTCGGTT CCAATGAATCCATTGTCATTCAGAGAATTTCTGAGGTTTAAGAACCTGAAAGTAGAAAGTTTCGTTTCCCTTGAAGAAGC TATTGATAATGCTTATAAGTTGCCTCTGGAGATATACAGCCTATTCCACGAATACCTGCTCATCGGAGGATTCCCTGAAA CTCTAACCTTAAAACCCGAAATGGCGAAAAGGTATTTGCGCGAAACATACGTTGAAAGAGTTCTTCTAAAGGACATTCCA ACAATCTTTGGAAACGTGGATAGTCTAAAACTCCTATCTACTTTCGCAATACTTGCTGAAAGCACGGGAAACAAAATAAA TTTCACTGAAGTCTCCAGTTCTCTCCGCCTGAAGATCGATACCGTAATAAAATACTCGGATTATATAAAGGCTTCCGGGC TGGTACATTTTATTCAGCGTATGAGTAAATCGGTAAGAGCACGTCGAAACATAATGCCAAAGGTGTATCTGGCACATCCG TCAATAGCAGGAGCCTTCAGCGAAATCAGGCTGAATGAAGGAGTTTTAGTGGAAAATGCAGTCGAAAATCATTTAAAAGC GGATAAATATTATTGGGAAGGAAAACGGGAAGTGGATTTTGTCGTAAACGGAATACCTATCGAAGTAAAGTTCTCAAACA AGCCAGAAACCGCTCTTAAAAATCTGCAGGAGCTCTCCAGATACTTAGATTTCAAAAGAGCCATCGTGGTCACCAGGGAC ATCTTAAAAAAAGAAAATTCGAATGATAAAGAGATTTTCTTCATACCAGCAGCGGTGTTTCTCCTTAGTGAGGTTCGGTA A
Upstream 100 bases:
>100_bases CTGCTGCATAGCAGCCCTTCGGTTCTTGTTTACTTACATCTATATTTTCCCGTTATGATGGTATAATATAACTGAATTAA TACCATAACGGGGTGATAAG
Downstream 100 bases:
>100_bases GCACGATAGTGCGTGGGTAAGCCCAGCTGCGCTGCGAAGTGCTGGACCACGTCCAGGAGGCTTGCAACGCTGTCAGCTGG TAGAGCGACGTTCGAAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MELFDILLSMNLWWRGTKIEVPEIKRDTYDEVQELYNTSKTMICIQGLRRVGKSTLIFQFINELLTNGADPEDILYISLD DPRLISFDFPIIEAYELWLKRFGRRKAYLFVDEAHFSRNFDLQLKRIYDNYGPKIVFTGSASLFLKKGISESLAGRVISV PMNPLSFREFLRFKNLKVESFVSLEEAIDNAYKLPLEIYSLFHEYLLIGGFPETLTLKPEMAKRYLRETYVERVLLKDIP TIFGNVDSLKLLSTFAILAESTGNKINFTEVSSSLRLKIDTVIKYSDYIKASGLVHFIQRMSKSVRARRNIMPKVYLAHP SIAGAFSEIRLNEGVLVENAVENHLKADKYYWEGKREVDFVVNGIPIEVKFSNKPETALKNLQELSRYLDFKRAIVVTRD ILKKENSNDKEIFFIPAAVFLLSEVR
Sequences:
>Translated_426_residues MELFDILLSMNLWWRGTKIEVPEIKRDTYDEVQELYNTSKTMICIQGLRRVGKSTLIFQFINELLTNGADPEDILYISLD DPRLISFDFPIIEAYELWLKRFGRRKAYLFVDEAHFSRNFDLQLKRIYDNYGPKIVFTGSASLFLKKGISESLAGRVISV PMNPLSFREFLRFKNLKVESFVSLEEAIDNAYKLPLEIYSLFHEYLLIGGFPETLTLKPEMAKRYLRETYVERVLLKDIP TIFGNVDSLKLLSTFAILAESTGNKINFTEVSSSLRLKIDTVIKYSDYIKASGLVHFIQRMSKSVRARRNIMPKVYLAHP SIAGAFSEIRLNEGVLVENAVENHLKADKYYWEGKREVDFVVNGIPIEVKFSNKPETALKNLQELSRYLDFKRAIVVTRD ILKKENSNDKEIFFIPAAVFLLSEVR >Mature_426_residues MELFDILLSMNLWWRGTKIEVPEIKRDTYDEVQELYNTSKTMICIQGLRRVGKSTLIFQFINELLTNGADPEDILYISLD DPRLISFDFPIIEAYELWLKRFGRRKAYLFVDEAHFSRNFDLQLKRIYDNYGPKIVFTGSASLFLKKGISESLAGRVISV PMNPLSFREFLRFKNLKVESFVSLEEAIDNAYKLPLEIYSLFHEYLLIGGFPETLTLKPEMAKRYLRETYVERVLLKDIP TIFGNVDSLKLLSTFAILAESTGNKINFTEVSSSLRLKIDTVIKYSDYIKASGLVHFIQRMSKSVRARRNIMPKVYLAHP SIAGAFSEIRLNEGVLVENAVENHLKADKYYWEGKREVDFVVNGIPIEVKFSNKPETALKNLQELSRYLDFKRAIVVTRD ILKKENSNDKEIFFIPAAVFLLSEVR
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR000767 - InterPro: IPR013317 [H]
Pfam domain/function: PF00308 Bac_DnaA [H]
EC number: NA
Molecular weight: Translated: 49373; Mature: 49373
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFDILLSMNLWWRGTKIEVPEIKRDTYDEVQELYNTSKTMICIQGLRRVGKSTLIFQF CHHHHHHHHCCCEECCCEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH INELLTNGADPEDILYISLDDPRLISFDFPIIEAYELWLKRFGRRKAYLFVDEAHFSRNF HHHHHHCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEHHCCCCCC DLQLKRIYDNYGPKIVFTGSASLFLKKGISESLAGRVISVPMNPLSFREFLRFKNLKVES CHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHCCCEEEECCCHHHHHHHHHHHCCCHHH FVSLEEAIDNAYKLPLEIYSLFHEYLLIGGFPETLTLKPEMAKRYLRETYVERVLLKDIP HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH TIFGNVDSLKLLSTFAILAESTGNKINFTEVSSSLRLKIDTVIKYSDYIKASGLVHFIQR HHHCCCHHHHHHHHHHHHHHCCCCEEEHHCCCCCEEEEEEHEEEHHHHHHHHHHHHHHHH MSKSVRARRNIMPKVYLAHPSIAGAFSEIRLNEGVLVENAVENHLKADKYYWEGKREVDF HHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEECCCCEEEE VVNGIPIEVKFSNKPETALKNLQELSRYLDFKRAIVVTRDILKKENSNDKEIFFIPAAVF EEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH LLSEVR HHHCCC >Mature Secondary Structure MELFDILLSMNLWWRGTKIEVPEIKRDTYDEVQELYNTSKTMICIQGLRRVGKSTLIFQF CHHHHHHHHCCCEECCCEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH INELLTNGADPEDILYISLDDPRLISFDFPIIEAYELWLKRFGRRKAYLFVDEAHFSRNF HHHHHHCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEHHCCCCCC DLQLKRIYDNYGPKIVFTGSASLFLKKGISESLAGRVISVPMNPLSFREFLRFKNLKVES CHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHCCCEEEECCCHHHHHHHHHHHCCCHHH FVSLEEAIDNAYKLPLEIYSLFHEYLLIGGFPETLTLKPEMAKRYLRETYVERVLLKDIP HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH TIFGNVDSLKLLSTFAILAESTGNKINFTEVSSSLRLKIDTVIKYSDYIKASGLVHFIQR HHHCCCHHHHHHHHHHHHHHCCCCEEEHHCCCCCEEEEEEHEEEHHHHHHHHHHHHHHHH MSKSVRARRNIMPKVYLAHPSIAGAFSEIRLNEGVLVENAVENHLKADKYYWEGKREVDF HHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEECCCCEEEE VVNGIPIEVKFSNKPETALKNLQELSRYLDFKRAIVVTRDILKKENSNDKEIFFIPAAVF EEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH LLSEVR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]