| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616605
Identifier: 239616605
GI number: 239616605
Start: 222927
End: 223742
Strand: Direct
Name: 239616605
Synonym: Kole_0198
Alternate gene names: NA
Gene position: 222927-223742 (Clockwise)
Preceding gene: 239616604
Following gene: 239616618
Centisome position: 9.68
GC content: 47.3
Gene sequence:
>816_bases ATGTCCTTCAAGAAAACCAGGATTCAACTTGCACGGGAAGCCTTCAAGAGAAGAGACCTTTCCTTACACCAGATGGCCCA CGACCCCAAAAAGATCGGTCAGGAGCCCTGGCACAAAACGGAAGCGGGAAGATACATAGGATCCGCTGTATATGGTGCCA GTGATGGCATAGTGACTACCTTTGCAGTTGTCGCCGGTGTCGCCGGAGCTCAGCTTGACCCAAAAATAGTTCTCATAATG GGGTTCGCCAACCTCTTCGCTGATGGATTTTCCATGGCTGTTGGAGATTACCTCTCAGAAAAATCCGAACAGGACTATAT AAAGAGCGAACGTGAGCGTGAAGCCTGGGAAGTGGATGTTAACCCGGAAGGTGAACGCGAAGAAATAAGAGAGATATACA AACGAAAAGGTTTGAAGGGTGAAAAGCTCGAACAGATGGTTGAATTGATCACATCGGACAAAGAATTGTGGATTGACACC ATGATGAAGGAAGAGCTCGGGATCATGGAAGATGAAGGAAGTTCTCCACTGAAAAGCGCTATCGTAACCTTCCTCTCTTT CGTTATCGCGGGATTCATGCCTTTAGTGGCTTACGTCTTCGCTTCTCTCGTACCCTTTTTCTCTCAGAACATGTTTTTAT CAGCGAGCTTAATAACGGCAGCAACTCTGTTTGTCGTTGGATCGCTGCGGCAGATGGTTACTGGAGTAAACTGGCTCATA GGCGGGCTTGAAATGTTGCTTGTGGGCGGACTTTCGGCAACGGTGGCTTACGGTATCGGGTATCTTTTAAGAACGGTATT CAACGTTGTAATTTGA
Upstream 100 bases:
>100_bases TGTACATCAACAAAATTGACAAATACCGTATCCTGAAAATAACAGCAAAGATATTATGCAAAAAATACGTCAATAGAAAA TCCAAAGGGGGAGAAAAGAA
Downstream 100 bases:
>100_bases AAAACTCCTCCGATACCTTTTCAAAAACCTCCGTCGTAGCTCTATCGATATTACAGACACGTATCAGCGATAAGGGCGTA TCCTTGTAATTTTCAAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Nodulin; Nodulin- Domain-Containing Protein; Ferritin-Like Domain Fused ; CCC1-Related Iron/Manganese Transporter Component
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSFKKTRIQLAREAFKRRDLSLHQMAHDPKKIGQEPWHKTEAGRYIGSAVYGASDGIVTTFAVVAGVAGAQLDPKIVLIM GFANLFADGFSMAVGDYLSEKSEQDYIKSEREREAWEVDVNPEGEREEIREIYKRKGLKGEKLEQMVELITSDKELWIDT MMKEELGIMEDEGSSPLKSAIVTFLSFVIAGFMPLVAYVFASLVPFFSQNMFLSASLITAATLFVVGSLRQMVTGVNWLI GGLEMLLVGGLSATVAYGIGYLLRTVFNVVI
Sequences:
>Translated_271_residues MSFKKTRIQLAREAFKRRDLSLHQMAHDPKKIGQEPWHKTEAGRYIGSAVYGASDGIVTTFAVVAGVAGAQLDPKIVLIM GFANLFADGFSMAVGDYLSEKSEQDYIKSEREREAWEVDVNPEGEREEIREIYKRKGLKGEKLEQMVELITSDKELWIDT MMKEELGIMEDEGSSPLKSAIVTFLSFVIAGFMPLVAYVFASLVPFFSQNMFLSASLITAATLFVVGSLRQMVTGVNWLI GGLEMLLVGGLSATVAYGIGYLLRTVFNVVI >Mature_270_residues SFKKTRIQLAREAFKRRDLSLHQMAHDPKKIGQEPWHKTEAGRYIGSAVYGASDGIVTTFAVVAGVAGAQLDPKIVLIMG FANLFADGFSMAVGDYLSEKSEQDYIKSEREREAWEVDVNPEGEREEIREIYKRKGLKGEKLEQMVELITSDKELWIDTM MKEELGIMEDEGSSPLKSAIVTFLSFVIAGFMPLVAYVFASLVPFFSQNMFLSASLITAATLFVVGSLRQMVTGVNWLIG GLEMLLVGGLSATVAYGIGYLLRTVFNVVI
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323249, Length=163, Percent_Identity=30.6748466257669, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30041; Mature: 29910
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKKTRIQLAREAFKRRDLSLHQMAHDPKKIGQEPWHKTEAGRYIGSAVYGASDGIVTT CCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH FAVVAGVAGAQLDPKIVLIMGFANLFADGFSMAVGDYLSEKSEQDYIKSEREREAWEVDV HHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEECC NPEGEREEIREIYKRKGLKGEKLEQMVELITSDKELWIDTMMKEELGIMEDEGSSPLKSA CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHH IVTFLSFVIAGFMPLVAYVFASLVPFFSQNMFLSASLITAATLFVVGSLRQMVTGVNWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLEMLLVGGLSATVAYGIGYLLRTVFNVVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SFKKTRIQLAREAFKRRDLSLHQMAHDPKKIGQEPWHKTEAGRYIGSAVYGASDGIVTT CCHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH FAVVAGVAGAQLDPKIVLIMGFANLFADGFSMAVGDYLSEKSEQDYIKSEREREAWEVDV HHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEECC NPEGEREEIREIYKRKGLKGEKLEQMVELITSDKELWIDTMMKEELGIMEDEGSSPLKSA CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHH IVTFLSFVIAGFMPLVAYVFASLVPFFSQNMFLSASLITAATLFVVGSLRQMVTGVNWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLEMLLVGGLSATVAYGIGYLLRTVFNVVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA