| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is argC
Identifier: 239616504
GI number: 239616504
Start: 108872
End: 109891
Strand: Direct
Name: argC
Synonym: Kole_0094
Alternate gene names: 239616504
Gene position: 108872-109891 (Clockwise)
Preceding gene: 239616503
Following gene: 239616505
Centisome position: 4.73
GC content: 41.57
Gene sequence:
>1020_bases ATGATAAGGGTTGGAATAATAGGTGCAACTGGCTACACAGGATTGGAACTCGTGAGAATACTCACCAATCACCCTGATGT TAAAATAACCTTTCTTTCTTCCAGGAGTTTTGCGGGGAAAAAATTGAATGACGTTTATCCCTTCTCGCTAAAAAATGAAA CCCTCGAAGAGATAGACCCTGAAAAAATCTCGAAAAATTGTGATGTTGTATTCACGGCACTTCCAGCCGGTGTTTCCTAT GAAATTGCCAGAAAATTGAAAGATGTTCGAATAATCGACCTTGGAGCTGATTTTAGATTCGATGACCCTGCCGTTTACGA GGAATGGTATTCTAAAAAGCTACCTGATTATGATCCTACTGAAAGGGTTTACGGCTTAACAGAGCTGTACAGGGAAAAGA TAAAGAATGCCAGATTCGTTGGAAATCCAGGCTGTTATCCTACGAGTGTTTTGCTTGCAACGGCTCCACTATTGAAGAAC GGTTCACTGGATGAAGAAACAATCATTGTGGATTCAAAATCCGGGGTTTCAGGTGCCGGAAAAAAGGAATCGATAGATTA CTCATTTTCTGAACTTAGCGGGAGTCTGAAGGCGTATAACGTGTCAAAGCACAGGCATGTCCCGGAAATGGAGCAGGAAA TGTCTAAACTTTGCGGTAAAAGACTAAAACTTGTCTTCACTCCACACCTCGTCCCGATGGTTAGAGGAATCCTTTCGACG ATATATGTGAAAACGGATCTATCTTTAGATGAGGTTTATGAATTATACCGGGAATACTATGGAAAAGAGAAATTCATCCA CGTCCTTCAACCAGGCGTTTATCCTTCAACAAAATGGACTTACGGTTCAAATCACGCTTTCATATCTATGGCAAAAGACG ATAGAACCGACACGCTCATCCTGATAAGTGTGATAGACAACCTCGTAAAAGGAGCGTCCGGACAGGCTGTTCAAAACATG AACGTCATGTTTTCCTTAGCCGAAGATGCAGGGCTTTCTTTCAATCCAATTTATCCATAA
Upstream 100 bases:
>100_bases AGGTCCTTGCGACTCAAAAGGTTTATGAAATGGTTAAAAAAGGTACCCCGTTTAGGGACGCTTACAGAAAAATAGCCCAA AGTTACGGAGGCGAGAAGAA
Downstream 100 bases:
>100_bases AAGGAGGTCGAAAAAATGAACATACCAAAAGGCTTTAAATTTGTAGGACTACATTGTGGGATAAAGAGAAAAAGAAAAGA TTTAGGAATAATATACTCAG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIRVGIIGATGYTGLELVRILTNHPDVKITFLSSRSFAGKKLNDVYPFSLKNETLEEIDPEKISKNCDVVFTALPAGVSY EIARKLKDVRIIDLGADFRFDDPAVYEEWYSKKLPDYDPTERVYGLTELYREKIKNARFVGNPGCYPTSVLLATAPLLKN GSLDEETIIVDSKSGVSGAGKKESIDYSFSELSGSLKAYNVSKHRHVPEMEQEMSKLCGKRLKLVFTPHLVPMVRGILST IYVKTDLSLDEVYELYREYYGKEKFIHVLQPGVYPSTKWTYGSNHAFISMAKDDRTDTLILISVIDNLVKGASGQAVQNM NVMFSLAEDAGLSFNPIYP
Sequences:
>Translated_339_residues MIRVGIIGATGYTGLELVRILTNHPDVKITFLSSRSFAGKKLNDVYPFSLKNETLEEIDPEKISKNCDVVFTALPAGVSY EIARKLKDVRIIDLGADFRFDDPAVYEEWYSKKLPDYDPTERVYGLTELYREKIKNARFVGNPGCYPTSVLLATAPLLKN GSLDEETIIVDSKSGVSGAGKKESIDYSFSELSGSLKAYNVSKHRHVPEMEQEMSKLCGKRLKLVFTPHLVPMVRGILST IYVKTDLSLDEVYELYREYYGKEKFIHVLQPGVYPSTKWTYGSNHAFISMAKDDRTDTLILISVIDNLVKGASGQAVQNM NVMFSLAEDAGLSFNPIYP >Mature_339_residues MIRVGIIGATGYTGLELVRILTNHPDVKITFLSSRSFAGKKLNDVYPFSLKNETLEEIDPEKISKNCDVVFTALPAGVSY EIARKLKDVRIIDLGADFRFDDPAVYEEWYSKKLPDYDPTERVYGLTELYREKIKNARFVGNPGCYPTSVLLATAPLLKN GSLDEETIIVDSKSGVSGAGKKESIDYSFSELSGSLKAYNVSKHRHVPEMEQEMSKLCGKRLKLVFTPHLVPMVRGILST IYVKTDLSLDEVYELYREYYGKEKFIHVLQPGVYPSTKWTYGSNHAFISMAKDDRTDTLILISVIDNLVKGASGQAVQNM NVMFSLAEDAGLSFNPIYP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=346, Percent_Identity=34.393063583815, Blast_Score=166, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320913, Length=348, Percent_Identity=35.3448275862069, Blast_Score=144, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_KOSOT (C5CHW7)
Other databases:
- EMBL: CP001634 - RefSeq: YP_002939826.1 - ProteinModelPortal: C5CHW7 - GeneID: 7967512 - GenomeReviews: CP001634_GR - KEGG: kol:Kole_0094 - ProtClustDB: PRK00436 - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 37999; Mature: 37999
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 145-145
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVGIIGATGYTGLELVRILTNHPDVKITFLSSRSFAGKKLNDVYPFSLKNETLEEIDP CEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCH EKISKNCDVVFTALPAGVSYEIARKLKDVRIIDLGADFRFDDPAVYEEWYSKKLPDYDPT HHHCCCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHH ERVYGLTELYREKIKNARFVGNPGCYPTSVLLATAPLLKNGSLDEETIIVDSKSGVSGAG HHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC KKESIDYSFSELSGSLKAYNVSKHRHVPEMEQEMSKLCGKRLKLVFTPHLVPMVRGILST CCCCCCCCHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHH IYVKTDLSLDEVYELYREYYGKEKFIHVLQPGVYPSTKWTYGSNHAFISMAKDDRTDTLI EEEEECCCHHHHHHHHHHHCCHHHEEHHHCCCCCCCCCEECCCCCEEEEECCCCCCCCEE LISVIDNLVKGASGQAVQNMNVMFSLAEDAGLSFNPIYP HHHHHHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MIRVGIIGATGYTGLELVRILTNHPDVKITFLSSRSFAGKKLNDVYPFSLKNETLEEIDP CEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCH EKISKNCDVVFTALPAGVSYEIARKLKDVRIIDLGADFRFDDPAVYEEWYSKKLPDYDPT HHHCCCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHH ERVYGLTELYREKIKNARFVGNPGCYPTSVLLATAPLLKNGSLDEETIIVDSKSGVSGAG HHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC KKESIDYSFSELSGSLKAYNVSKHRHVPEMEQEMSKLCGKRLKLVFTPHLVPMVRGILST CCCCCCCCHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHH IYVKTDLSLDEVYELYREYYGKEKFIHVLQPGVYPSTKWTYGSNHAFISMAKDDRTDTLI EEEEECCCHHHHHHHHHHHCCHHHEEHHHCCCCCCCCCEECCCCCEEEEECCCCCCCCEE LISVIDNLVKGASGQAVQNMNVMFSLAEDAGLSFNPIYP HHHHHHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA