| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616491
Identifier: 239616491
GI number: 239616491
Start: 95762
End: 96721
Strand: Direct
Name: 239616491
Synonym: Kole_0081
Alternate gene names: NA
Gene position: 95762-96721 (Clockwise)
Preceding gene: 239616490
Following gene: 239616492
Centisome position: 4.16
GC content: 45.62
Gene sequence:
>960_bases GTGATCTCGATTTTTGAGCAGGGGTTGCTCTTATCTATAGCCGCCATGGGTGTTTACATATCTTTTCGCATTGTTGATCT TCCTGATTTGACACCGGACGGATCCTATGTACTTGGGGGAGCCGTCGCAGTGGCACTCCTTCGTTCCGGTCATTGGTGGG TCCACTCTCTGATTCTCGCCGTTATCGCATCTGCTCTGGCAGGTGTGGTAACGGCCTTCATAACCACAAGGTTTCGTGTT AATTCTTTGCTTGCCTCAATAATGGTTATGACTGGACTCTATTCAGTCAATATTAGAGTGATGAAGGCACCGAATCTTCC GATTCCAAGGATTGACACTGGAGCAGTCATGAATTACGAGCAGATGGCAGGAAAAACTCCTTTGGACGATCTTCTGGGTA GCACTGTTGCTTCTTATCAGGGTTCAGGTGCGAAAGCGATTTCAATACCTTTCAACGGTATTTCTGACGGAAGAGATCTA TTCATTATAACTCTCTTTGCGGTAGGAGCTCTGCTGCTCATGTGGGTTTTCTTGAAAACCGAGTTTGGAATCATGTTCAG GGGTTATGGGCGAAATCGGTTTGCTGTTAAGACACTCGGTATGAACCCTAATCTTTTTGCTTATGTCGGGTTAGCCCTGG GGAACGCATTCGCTGGTCTTTCAGGAGGTCTTTTCTCAATGTACAGTGGTTTTGCAGATGTCAATATGGGTCTTGGTATC GTTGTCATATGTCTTGCTTCCGTAATTCTTGGGGAGATACTTCTCGGTAAATTTGGCTGGATGTACGGAATGTTATGCCC ACTTTTTGGAGCATTAGCGTATCAGCTCCTTCTCACTGTCGCGATGAAGTACGGCTATAAGGTGGGTTTTAAACCAACTG ATATGAAGCTCCTGACAGCCGTATTTGTGGTTGTTGTCATCGCATTGAGACGCTTTAAGAAAAGTGAGGTGACAACATGA
Upstream 100 bases:
>100_bases TGAATTTGGATCTTGCGAAAGCACTTGGAGTGGAGATACCAAAAGAACTTGTGGAGAGAGCCGATATAGTTGTTGAAAAT GGTGTTGAGAGGTGACAAAT
Downstream 100 bases:
>100_bases TAAGTGTGAAAAACGTTGAGGTTGTATACAATAGGGGAACGTTGGATGAAAAAACAGCGCTTAAAGGTGTGTCAATGAAA ATCCTTCCAGGTGAGTTTGT
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MISIFEQGLLLSIAAMGVYISFRIVDLPDLTPDGSYVLGGAVAVALLRSGHWWVHSLILAVIASALAGVVTAFITTRFRV NSLLASIMVMTGLYSVNIRVMKAPNLPIPRIDTGAVMNYEQMAGKTPLDDLLGSTVASYQGSGAKAISIPFNGISDGRDL FIITLFAVGALLLMWVFLKTEFGIMFRGYGRNRFAVKTLGMNPNLFAYVGLALGNAFAGLSGGLFSMYSGFADVNMGLGI VVICLASVILGEILLGKFGWMYGMLCPLFGALAYQLLLTVAMKYGYKVGFKPTDMKLLTAVFVVVVIALRRFKKSEVTT
Sequences:
>Translated_319_residues MISIFEQGLLLSIAAMGVYISFRIVDLPDLTPDGSYVLGGAVAVALLRSGHWWVHSLILAVIASALAGVVTAFITTRFRV NSLLASIMVMTGLYSVNIRVMKAPNLPIPRIDTGAVMNYEQMAGKTPLDDLLGSTVASYQGSGAKAISIPFNGISDGRDL FIITLFAVGALLLMWVFLKTEFGIMFRGYGRNRFAVKTLGMNPNLFAYVGLALGNAFAGLSGGLFSMYSGFADVNMGLGI VVICLASVILGEILLGKFGWMYGMLCPLFGALAYQLLLTVAMKYGYKVGFKPTDMKLLTAVFVVVVIALRRFKKSEVTT >Mature_319_residues MISIFEQGLLLSIAAMGVYISFRIVDLPDLTPDGSYVLGGAVAVALLRSGHWWVHSLILAVIASALAGVVTAFITTRFRV NSLLASIMVMTGLYSVNIRVMKAPNLPIPRIDTGAVMNYEQMAGKTPLDDLLGSTVASYQGSGAKAISIPFNGISDGRDL FIITLFAVGALLLMWVFLKTEFGIMFRGYGRNRFAVKTLGMNPNLFAYVGLALGNAFAGLSGGLFSMYSGFADVNMGLGI VVICLASVILGEILLGKFGWMYGMLCPLFGALAYQLLLTVAMKYGYKVGFKPTDMKLLTAVFVVVVIALRRFKKSEVTT
Specific function: Unknown
COG id: COG4120
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 34293; Mature: 34293
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIFEQGLLLSIAAMGVYISFRIVDLPDLTPDGSYVLGGAVAVALLRSGHWWVHSLILA CCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH VIASALAGVVTAFITTRFRVNSLLASIMVMTGLYSVNIRVMKAPNLPIPRIDTGAVMNYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCHH QMAGKTPLDDLLGSTVASYQGSGAKAISIPFNGISDGRDLFIITLFAVGALLLMWVFLKT HHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EFGIMFRGYGRNRFAVKTLGMNPNLFAYVGLALGNAFAGLSGGLFSMYSGFADVNMGLGI CCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCCHHH VVICLASVILGEILLGKFGWMYGMLCPLFGALAYQLLLTVAMKYGYKVGFKPTDMKLLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VFVVVVIALRRFKKSEVTT HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MISIFEQGLLLSIAAMGVYISFRIVDLPDLTPDGSYVLGGAVAVALLRSGHWWVHSLILA CCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH VIASALAGVVTAFITTRFRVNSLLASIMVMTGLYSVNIRVMKAPNLPIPRIDTGAVMNYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCHH QMAGKTPLDDLLGSTVASYQGSGAKAISIPFNGISDGRDLFIITLFAVGALLLMWVFLKT HHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EFGIMFRGYGRNRFAVKTLGMNPNLFAYVGLALGNAFAGLSGGLFSMYSGFADVNMGLGI CCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCCHHH VVICLASVILGEILLGKFGWMYGMLCPLFGALAYQLLLTVAMKYGYKVGFKPTDMKLLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VFVVVVIALRRFKKSEVTT HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]