Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is 239616490

Identifier: 239616490

GI number: 239616490

Start: 94791

End: 95756

Strand: Direct

Name: 239616490

Synonym: Kole_0080

Alternate gene names: NA

Gene position: 94791-95756 (Clockwise)

Preceding gene: 239616487

Following gene: 239616491

Centisome position: 4.12

GC content: 44.31

Gene sequence:

>966_bases
ATGAAAAGGTTTATTACCGTCGTGGTCATCCTTCTTTCAATTGTCGGTTTTGGTGTTGTCAAGATAGGTGTTACTCAGAT
TGTCGATCATCCAGCACTCGACGCAGTTGTAAAGGGTATGATAAGTTTTCTGGAAGAATCGGGTTTTGAAGTTGGCAAGG
ACATTGTATTGGATAGGCAAAGTGCTCAGGGAAGTGTGCAGAATGCGGTTGCAATAGCCAAGAAGTTTGCTTCCGAGGAC
ATCGATATTGTTGTTGCCGTGACAACCCCCTCGGCTCAAGCATGTGCGCAGGCTATAACTGACAGGCCGGTTGTCTTTTC
AGCGGTAACCGATCCTGTTGGAGCAGGATTGATCAAACAATTTGGTAAGAATGAAGGGAACATCGTTGGAATCTCTGATA
TGGTACCAGTTGCAACGCATTTGAAGCTCATAAGAATGGTGTTTCCCGAGGCTAAGAAGGTAGGGGTGATCTACAATCCG
GGAGAAGCCAATTCTGTGACTCTGACAGAGATTGCAAAATCAGCTGCCCCAAGTCTTGGTTTTACCATTGTCGATATTCC
CGGTACAACCCCAAATGAAATGATAACAGCCCTTAACAGTATTGGACCAAGCGTTGATGTTATTTACGTTGGAACAGATA
ATACCGTAGCATCCTCAATTCAAGCAATTGGATCCGCTGCTATCAAGCTTAAAAAGCCGATAGTTGCTGCGGACATTTCC
ATAGCAAGAGGAGGAGGAATCATAGGATTTGGATTTAACTATTTTCAGGTAGGAATTGAAACCGGGCGTATAGTTTTGGC
TTTGCTGAAAGGAGCAAAGCCGAGCGAGATTGAATCAAGGATTCTCGGGCCTGATTCTTTGGAGTTGTTTGTGAATTTGG
ATCTTGCGAAAGCACTTGGAGTGGAGATACCAAAAGAACTTGTGGAGAGAGCCGATATAGTTGTTGAAAATGGTGTTGAG
AGGTGA

Upstream 100 bases:

>100_bases
ATACCACTTGCTACATAATTGGGGAACTCATAAGGTAGAAGAAGAGGGCATCTGAAAAAGATGCCCTCTTTTTTTATATA
ACTTTACAGGGGGTGTTTGT

Downstream 100 bases:

>100_bases
CAAATGTGATCTCGATTTTTGAGCAGGGGTTGCTCTTATCTATAGCCGCCATGGGTGTTTACATATCTTTTCGCATTGTT
GATCTTCCTGATTTGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; ABC Transporter; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKRFITVVVILLSIVGFGVVKIGVTQIVDHPALDAVVKGMISFLEESGFEVGKDIVLDRQSAQGSVQNAVAIAKKFASED
IDIVVAVTTPSAQACAQAITDRPVVFSAVTDPVGAGLIKQFGKNEGNIVGISDMVPVATHLKLIRMVFPEAKKVGVIYNP
GEANSVTLTEIAKSAAPSLGFTIVDIPGTTPNEMITALNSIGPSVDVIYVGTDNTVASSIQAIGSAAIKLKKPIVAADIS
IARGGGIIGFGFNYFQVGIETGRIVLALLKGAKPSEIESRILGPDSLELFVNLDLAKALGVEIPKELVERADIVVENGVE
R

Sequences:

>Translated_321_residues
MKRFITVVVILLSIVGFGVVKIGVTQIVDHPALDAVVKGMISFLEESGFEVGKDIVLDRQSAQGSVQNAVAIAKKFASED
IDIVVAVTTPSAQACAQAITDRPVVFSAVTDPVGAGLIKQFGKNEGNIVGISDMVPVATHLKLIRMVFPEAKKVGVIYNP
GEANSVTLTEIAKSAAPSLGFTIVDIPGTTPNEMITALNSIGPSVDVIYVGTDNTVASSIQAIGSAAIKLKKPIVAADIS
IARGGGIIGFGFNYFQVGIETGRIVLALLKGAKPSEIESRILGPDSLELFVNLDLAKALGVEIPKELVERADIVVENGVE
R
>Mature_321_residues
MKRFITVVVILLSIVGFGVVKIGVTQIVDHPALDAVVKGMISFLEESGFEVGKDIVLDRQSAQGSVQNAVAIAKKFASED
IDIVVAVTTPSAQACAQAITDRPVVFSAVTDPVGAGLIKQFGKNEGNIVGISDMVPVATHLKLIRMVFPEAKKVGVIYNP
GEANSVTLTEIAKSAAPSLGFTIVDIPGTTPNEMITALNSIGPSVDVIYVGTDNTVASSIQAIGSAAIKLKKPIVAADIS
IARGGGIIGFGFNYFQVGIETGRIVLALLKGAKPSEIESRILGPDSLELFVNLDLAKALGVEIPKELVERADIVVENGVE
R

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33556; Mature: 33556

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFITVVVILLSIVGFGVVKIGVTQIVDHPALDAVVKGMISFLEESGFEVGKDIVLDRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHEEECC
SAQGSVQNAVAIAKKFASEDIDIVVAVTTPSAQACAQAITDRPVVFSAVTDPVGAGLIKQ
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHH
FGKNEGNIVGISDMVPVATHLKLIRMVFPEAKKVGVIYNPGEANSVTLTEIAKSAAPSLG
HCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCC
FTIVDIPGTTPNEMITALNSIGPSVDVIYVGTDNTVASSIQAIGSAAIKLKKPIVAADIS
EEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECEE
IARGGGIIGFGFNYFQVGIETGRIVLALLKGAKPSEIESRILGPDSLELFVNLDLAKALG
EECCCCEEEECCEEEEEECCCCHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEECHHHHHC
VEIPKELVERADIVVENGVER
CCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRFITVVVILLSIVGFGVVKIGVTQIVDHPALDAVVKGMISFLEESGFEVGKDIVLDRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHEEECC
SAQGSVQNAVAIAKKFASEDIDIVVAVTTPSAQACAQAITDRPVVFSAVTDPVGAGLIKQ
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHH
FGKNEGNIVGISDMVPVATHLKLIRMVFPEAKKVGVIYNPGEANSVTLTEIAKSAAPSLG
HCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCC
FTIVDIPGTTPNEMITALNSIGPSVDVIYVGTDNTVASSIQAIGSAAIKLKKPIVAADIS
EEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECEE
IARGGGIIGFGFNYFQVGIETGRIVLALLKGAKPSEIESRILGPDSLELFVNLDLAKALG
EECCCCEEEECCEEEEEECCCCHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEECHHHHHC
VEIPKELVERADIVVENGVER
CCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA