| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yceI [H]
Identifier: 239616454
GI number: 239616454
Start: 49390
End: 50667
Strand: Direct
Name: yceI [H]
Synonym: Kole_0043
Alternate gene names: 239616454
Gene position: 49390-50667 (Clockwise)
Preceding gene: 239616453
Following gene: 239616455
Centisome position: 2.15
GC content: 47.97
Gene sequence:
>1278_bases ATGATCATCGATAAAGTTGTGGAAAAATACGTGTCCCGCGCCAGGCAATTGAGAATTCTTCTTGTGACATCGCTTGAATG GATGCTTGTAGCGGCTGGTGTGATGGTGTTGTCATTAACACTCCCGTCGATACTCAAAGAACTTCCAGGCGCTGCAGAGC TCAAAGGTACCATAGCGAGCTCCGTCTTCATGGGGATGCTTGTGGGAGCTTTGAGTTCCGGTTTTATCTCCGATATTTTT GGAAGAAAAGTGGGCAATATCATGTTTCTGGTTTTAGCAGGGCTATTTTCCGGTTTAACGGGGGCTTCTTCCGATGGGAC GAATTTCATCATCAACCGTTTTTTAGCAGGGGTTGGTTACGGCGGGCTCTTACCGGTTGTCAACGCCTATCTGACTGAAT TCACGGCCATAAAAATACGGGGGCTTTATCTGACACTGCTTGAAGCCAGCTGGGCTATTGGAAGTATTCTGCTGGGGGTT TATACCATTTTGACACTGGGCGTGTTTGGTTGGAGAGCGTCCTACTACCTCCTCACTCTGGTTTCTTTGCCGCTTCTCGC TGTGGTCTCCCTTCTTCCCGAAAGCCCAAAGTTCGCCTATATGAGAGGGGGCAGGAGAGCTCTAGAAAAAGCTCTCGGAA CAAAGATAGATGAGAAAGTAGAAATGCACAAAATAAAGAAAGTTCCTTTTCTCGAGATCCTGTCGAAGCGCTTTGCACCT CGTACACTGATGGTCTGGTTTAGCTGGTTCACCGTTAGTTTTATTTACTACGGCCTCTTCATCTGGGCCCCGAAGATCTT CCGTTCCAAGGGAATCGCTCCGGGGAATGCCCTCATGTACACATTCTTTATGTTGATGATGCAGCTTCCTGGTTATTTGC TTGCTGCATACCTTATTGAAAGAATAGGACGAAAGAAGAGCATCATGTTCTTCTTTAGCGGAACCGCTGTATCCGCACTG CTTCTTGCAGCTGTCAATAGCCAGGGAATGCTCCTGTTTTCAAGTGTCGTAATGTCCGTTTTCTGTCTTGGCGCCTGGGG AATGGTTTATGCCTACACACCGGAACTCTATCCTACCGAGATGCGCGGCCTGGGAAATGGTTCGGCCGGAGTGATGGCAA GAATCGCTGGAATCATAGCTCCCTATTATACCGCCTTCATGATGGATAAAACCGGTTCTATTACCTGGGTCATGATCCCC ATGTCACTGCTGGCTATAACGACTGTTATCCTGAACGCCACTTTTGGAATCGAAACCCGGGGAAAACCCGTAGAATAA
Upstream 100 bases:
>100_bases ATTGAGGCTCCAAATCAAAAAATCATGGATACAATCATAAAAAATCTGGATGAGAAGGGTTATCTGCTCAAATAACGTAA CAATTTTGGAGGTGGTATGG
Downstream 100 bases:
>100_bases CACCTCCAATTAAAAAAAGGAAATGGGGACAATACTGTCCCCGTTTTTTATTGATGAAAACCTGATTGCTTCTTTTTGAA GGAGGTGCTCTTCCTCCATG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIIDKVVEKYVSRARQLRILLVTSLEWMLVAAGVMVLSLTLPSILKELPGAAELKGTIASSVFMGMLVGALSSGFISDIF GRKVGNIMFLVLAGLFSGLTGASSDGTNFIINRFLAGVGYGGLLPVVNAYLTEFTAIKIRGLYLTLLEASWAIGSILLGV YTILTLGVFGWRASYYLLTLVSLPLLAVVSLLPESPKFAYMRGGRRALEKALGTKIDEKVEMHKIKKVPFLEILSKRFAP RTLMVWFSWFTVSFIYYGLFIWAPKIFRSKGIAPGNALMYTFFMLMMQLPGYLLAAYLIERIGRKKSIMFFFSGTAVSAL LLAAVNSQGMLLFSSVVMSVFCLGAWGMVYAYTPELYPTEMRGLGNGSAGVMARIAGIIAPYYTAFMMDKTGSITWVMIP MSLLAITTVILNATFGIETRGKPVE
Sequences:
>Translated_425_residues MIIDKVVEKYVSRARQLRILLVTSLEWMLVAAGVMVLSLTLPSILKELPGAAELKGTIASSVFMGMLVGALSSGFISDIF GRKVGNIMFLVLAGLFSGLTGASSDGTNFIINRFLAGVGYGGLLPVVNAYLTEFTAIKIRGLYLTLLEASWAIGSILLGV YTILTLGVFGWRASYYLLTLVSLPLLAVVSLLPESPKFAYMRGGRRALEKALGTKIDEKVEMHKIKKVPFLEILSKRFAP RTLMVWFSWFTVSFIYYGLFIWAPKIFRSKGIAPGNALMYTFFMLMMQLPGYLLAAYLIERIGRKKSIMFFFSGTAVSAL LLAAVNSQGMLLFSSVVMSVFCLGAWGMVYAYTPELYPTEMRGLGNGSAGVMARIAGIIAPYYTAFMMDKTGSITWVMIP MSLLAITTVILNATFGIETRGKPVE >Mature_425_residues MIIDKVVEKYVSRARQLRILLVTSLEWMLVAAGVMVLSLTLPSILKELPGAAELKGTIASSVFMGMLVGALSSGFISDIF GRKVGNIMFLVLAGLFSGLTGASSDGTNFIINRFLAGVGYGGLLPVVNAYLTEFTAIKIRGLYLTLLEASWAIGSILLGV YTILTLGVFGWRASYYLLTLVSLPLLAVVSLLPESPKFAYMRGGRRALEKALGTKIDEKVEMHKIKKVPFLEILSKRFAP RTLMVWFSWFTVSFIYYGLFIWAPKIFRSKGIAPGNALMYTFFMLMMQLPGYLLAAYLIERIGRKKSIMFFFSGTAVSAL LLAAVNSQGMLLFSSVVMSVFCLGAWGMVYAYTPELYPTEMRGLGNGSAGVMARIAGIIAPYYTAFMMDKTGSITWVMIP MSLLAITTVILNATFGIETRGKPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=448, Percent_Identity=28.7946428571429, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI166197673, Length=392, Percent_Identity=28.8265306122449, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI213021148, Length=437, Percent_Identity=25.629290617849, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI31542327, Length=366, Percent_Identity=25.1366120218579, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI7662270, Length=324, Percent_Identity=25.9259259259259, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI11415038, Length=367, Percent_Identity=26.7029972752044, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI4507005, Length=347, Percent_Identity=27.9538904899135, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI216548223, Length=338, Percent_Identity=24.2603550295858, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI302148518, Length=346, Percent_Identity=25.7225433526012, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI73695465, Length=285, Percent_Identity=25.9649122807018, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI24497490, Length=347, Percent_Identity=26.5129682997118, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI24497497, Length=347, Percent_Identity=27.3775216138329, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI90669191, Length=347, Percent_Identity=27.3775216138329, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI262399383, Length=278, Percent_Identity=25.5395683453237, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4506999, Length=369, Percent_Identity=24.9322493224932, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1788068, Length=403, Percent_Identity=26.0545905707196, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87081723, Length=347, Percent_Identity=27.0893371757925, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788074, Length=391, Percent_Identity=28.1329923273657, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786229, Length=429, Percent_Identity=23.0769230769231, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790463, Length=444, Percent_Identity=23.4234234234234, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI87082159, Length=363, Percent_Identity=26.4462809917355, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32564663, Length=455, Percent_Identity=28.1318681318681, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI133900837, Length=396, Percent_Identity=25, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI72003720, Length=376, Percent_Identity=25.531914893617, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71989525, Length=398, Percent_Identity=25.1256281407035, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71989531, Length=398, Percent_Identity=25.1256281407035, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71984734, Length=406, Percent_Identity=23.1527093596059, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71996338, Length=190, Percent_Identity=26.8421052631579, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17554160, Length=404, Percent_Identity=22.5247524752475, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71991859, Length=380, Percent_Identity=22.8947368421053, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17542342, Length=370, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71991854, Length=380, Percent_Identity=22.8947368421053, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71985447, Length=347, Percent_Identity=24.7838616714697, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI19922874, Length=406, Percent_Identity=27.0935960591133, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24640198, Length=449, Percent_Identity=27.1714922048998, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24640196, Length=449, Percent_Identity=27.1714922048998, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24640200, Length=449, Percent_Identity=27.1714922048998, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24649618, Length=351, Percent_Identity=23.6467236467236, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922616, Length=416, Percent_Identity=25.4807692307692, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI21355657, Length=365, Percent_Identity=26.5753424657534, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI161077756, Length=423, Percent_Identity=24.822695035461, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649616, Length=404, Percent_Identity=21.5346534653465, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46547; Mature: 46547
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDKVVEKYVSRARQLRILLVTSLEWMLVAAGVMVLSLTLPSILKELPGAAELKGTIAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SVFMGMLVGALSSGFISDIFGRKVGNIMFLVLAGLFSGLTGASSDGTNFIINRFLAGVGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC GGLLPVVNAYLTEFTAIKIRGLYLTLLEASWAIGSILLGVYTILTLGVFGWRASYYLLTL CHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLPLLAVVSLLPESPKFAYMRGGRRALEKALGTKIDEKVEMHKIKKVPFLEILSKRFAP HHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCC RTLMVWFSWFTVSFIYYGLFIWAPKIFRSKGIAPGNALMYTFFMLMMQLPGYLLAAYLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH RIGRKKSIMFFFSGTAVSALLLAAVNSQGMLLFSSVVMSVFCLGAWGMVYAYTPELYPTE HHCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH MRGLGNGSAGVMARIAGIIAPYYTAFMMDKTGSITWVMIPMSLLAITTVILNATFGIETR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC GKPVE CCCCC >Mature Secondary Structure MIIDKVVEKYVSRARQLRILLVTSLEWMLVAAGVMVLSLTLPSILKELPGAAELKGTIAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SVFMGMLVGALSSGFISDIFGRKVGNIMFLVLAGLFSGLTGASSDGTNFIINRFLAGVGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC GGLLPVVNAYLTEFTAIKIRGLYLTLLEASWAIGSILLGVYTILTLGVFGWRASYYLLTL CHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLPLLAVVSLLPESPKFAYMRGGRRALEKALGTKIDEKVEMHKIKKVPFLEILSKRFAP HHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCC RTLMVWFSWFTVSFIYYGLFIWAPKIFRSKGIAPGNALMYTFFMLMMQLPGYLLAAYLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH RIGRKKSIMFFFSGTAVSALLLAAVNSQGMLLFSSVVMSVFCLGAWGMVYAYTPELYPTE HHCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH MRGLGNGSAGVMARIAGIIAPYYTAFMMDKTGSITWVMIPMSLLAITTVILNATFGIETR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC GKPVE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]