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The map label for this gene is yrxA [H]

Identifier: 239616453

GI number: 239616453

Start: 48858

End: 49364

Strand: Direct

Name: yrxA [H]

Synonym: Kole_0042

Alternate gene names: 239616453

Gene position: 48858-49364 (Clockwise)

Preceding gene: 239616432

Following gene: 239616454

Centisome position: 2.12

GC content: 41.62

Gene sequence:

>507_bases
ATGCGCAAAGAAAGGCTGGAGGGAATCCTCGAAATCCTGTCAAGTGCCAAACAACCAATAAGTGGATTGGAACTCGCAGA
AAAGCTCAATGTGAGCAGACAGATGATCGTCAGAGATATTGCAACCCTCAGAAATGCAGGGCATGAAATCCTTTCAACCG
CTCATGGATATCTCTTAAAAAAACAGAAAACCGTTAAGAAACTGGTTGCCGTTGCACACGGTAGTGAGAACATCATGGAT
GAACTTTTAACCATTGTGAGAAACGGCGGAAGTGTTGTGGATGTGATCGTTGAACATCCTGTTTATGGCGAATTGAAGGG
AAATATAGGTGTGAGTACAGAAGAAGATGTCATCAGATTCATTTCACTACTCAAAGGTAGCAGTGCATCACCACTTCTGG
CAGTCTCGAAAGACGGAATACATCTTCATACGATTGAGGCTCCAAATCAAAAAATCATGGATACAATCATAAAAAATCTG
GATGAGAAGGGTTATCTGCTCAAATAA

Upstream 100 bases:

>100_bases
CATCCCCTGACTCCAGCCTCGCATAAGCGAGGCTTTTTATTTTGACTTCTTGATTTTCTGCAAATTTACTGCTATTATCA
GATACGAAGAGGTGATCTAG

Downstream 100 bases:

>100_bases
CGTAACAATTTTGGAGGTGGTATGGATGATCATCGATAAAGTTGTGGAAAAATACGTGTCCCGCGCCAGGCAATTGAGAA
TTCTTCTTGTGACATCGCTT

Product: 3H domain protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRKERLEGILEILSSAKQPISGLELAEKLNVSRQMIVRDIATLRNAGHEILSTAHGYLLKKQKTVKKLVAVAHGSENIMD
ELLTIVRNGGSVVDVIVEHPVYGELKGNIGVSTEEDVIRFISLLKGSSASPLLAVSKDGIHLHTIEAPNQKIMDTIIKNL
DEKGYLLK

Sequences:

>Translated_168_residues
MRKERLEGILEILSSAKQPISGLELAEKLNVSRQMIVRDIATLRNAGHEILSTAHGYLLKKQKTVKKLVAVAHGSENIMD
ELLTIVRNGGSVVDVIVEHPVYGELKGNIGVSTEEDVIRFISLLKGSSASPLLAVSKDGIHLHTIEAPNQKIMDTIIKNL
DEKGYLLK
>Mature_168_residues
MRKERLEGILEILSSAKQPISGLELAEKLNVSRQMIVRDIATLRNAGHEILSTAHGYLLKKQKTVKKLVAVAHGSENIMD
ELLTIVRNGGSVVDVIVEHPVYGELKGNIGVSTEEDVIRFISLLKGSSASPLLAVSKDGIHLHTIEAPNQKIMDTIIKNL
DEKGYLLK

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 18425; Mature: 18425

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKERLEGILEILSSAKQPISGLELAEKLNVSRQMIVRDIATLRNAGHEILSTAHGYLLK
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KQKTVKKLVAVAHGSENIMDELLTIVRNGGSVVDVIVEHPVYGELKGNIGVSTEEDVIRF
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHEECCCCCCCCCCCCCCCCHHHHHHH
ISLLKGSSASPLLAVSKDGIHLHTIEAPNQKIMDTIIKNLDEKGYLLK
HHHHCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRKERLEGILEILSSAKQPISGLELAEKLNVSRQMIVRDIATLRNAGHEILSTAHGYLLK
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KQKTVKKLVAVAHGSENIMDELLTIVRNGGSVVDVIVEHPVYGELKGNIGVSTEEDVIRF
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHEECCCCCCCCCCCCCCCCHHHHHHH
ISLLKGSSASPLLAVSKDGIHLHTIEAPNQKIMDTIIKNLDEKGYLLK
HHHHCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]