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The map label for this gene is yhdE [C]

Identifier: 238925633

GI number: 238925633

Start: 3124805

End: 3125422

Strand: Reverse

Name: yhdE [C]

Synonym: EUBREC_3290

Alternate gene names: 238925633

Gene position: 3125422-3124805 (Counterclockwise)

Preceding gene: 238925634

Following gene: 238925631

Centisome position: 90.6

GC content: 46.93

Gene sequence:

>618_bases
ATGAGTCAGATAATATTGGCGTCGGCATCACCGCGCCGAAAGGAATTATTAGAGCAGATTGGGGCAGAGTTTGTTGTCTG
TCCTGCAAAGGGAGAAGAGATAATCACAGAGGAGGAGCCATCTGCGGTTGTCATGGAGTTATCCCGTCAAAAGGCAGAGG
AGGTAGCGTCAGGTGTGCTTACCTACAATGAACAGCATGCAGAGCTTGTGACACCGCAGGATATTCTTGTAATCGGAGCG
GATACGGTAGTGGCTTATGAGAATCAGATTCTTGGAAAGCCGAAGGACGAAGAAGATGCCAGGCGTATGCTTTCGATGCT
TTCGGGAAAAACGCACAGTGTCTATACAGGGGTAACGTTTGTTTTTATTGACAAAGCCGGAAGAACCGGAGAACACTGCT
TTTATGAGAAGACGGATGTCAGTATGTATAAATTGACAGAAGAGGAAATTGACCGCTATATTTCAAGCGGGGATCCGATG
GATAAAGCAGGAAGCTACGGGATACAGGGACGCTTTGCCATCCACATTAAGGGAATACATGGTGATTACAATAATGTGGT
AGGGCTTCCGGTAGCGCGCCTGTATCAGGAGCTTAGAAAGCTTGGAGTTGATGTTTAG

Upstream 100 bases:

>100_bases
CTGTATAATATAAGTGGAAACGTGTAATCAGTCATGAGGAATTGTATTCTTCAGATGAAACAGCCACAAAATCCAAAGTG
AAGGAAAAGGTAAAACAAAT

Downstream 100 bases:

>100_bases
CGAAGTCTTTTTTTAATAGCCGGTCCGATAAGCATGGCAATTATCATTTTTATCAGGTCGCCCGGGATAAATGGGAACAC
ACATATTGAGAGCGCACCGC

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSQIILASASPRRKELLEQIGAEFVVCPAKGEEIITEEEPSAVVMELSRQKAEEVASGVLTYNEQHAELVTPQDILVIGA
DTVVAYENQILGKPKDEEDARRMLSMLSGKTHSVYTGVTFVFIDKAGRTGEHCFYEKTDVSMYKLTEEEIDRYISSGDPM
DKAGSYGIQGRFAIHIKGIHGDYNNVVGLPVARLYQELRKLGVDV

Sequences:

>Translated_205_residues
MSQIILASASPRRKELLEQIGAEFVVCPAKGEEIITEEEPSAVVMELSRQKAEEVASGVLTYNEQHAELVTPQDILVIGA
DTVVAYENQILGKPKDEEDARRMLSMLSGKTHSVYTGVTFVFIDKAGRTGEHCFYEKTDVSMYKLTEEEIDRYISSGDPM
DKAGSYGIQGRFAIHIKGIHGDYNNVVGLPVARLYQELRKLGVDV
>Mature_204_residues
SQIILASASPRRKELLEQIGAEFVVCPAKGEEIITEEEPSAVVMELSRQKAEEVASGVLTYNEQHAELVTPQDILVIGAD
TVVAYENQILGKPKDEEDARRMLSMLSGKTHSVYTGVTFVFIDKAGRTGEHCFYEKTDVSMYKLTEEEIDRYISSGDPMD
KAGSYGIQGRFAIHIKGIHGDYNNVVGLPVARLYQELRKLGVDV

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=205, Percent_Identity=43.4146341463415, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI291045183, Length=205, Percent_Identity=39.5121951219512, Blast_Score=129, Evalue=1e-30,
Organism=Homo sapiens, GI291045181, Length=160, Percent_Identity=45, Blast_Score=120, Evalue=6e-28,
Organism=Homo sapiens, GI310133124, Length=129, Percent_Identity=48.062015503876, Blast_Score=115, Evalue=2e-26,
Organism=Escherichia coli, GI1789646, Length=209, Percent_Identity=38.2775119617225, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI87081830, Length=204, Percent_Identity=34.3137254901961, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193202443, Length=195, Percent_Identity=37.9487179487179, Blast_Score=112, Evalue=9e-26,
Organism=Saccharomyces cerevisiae, GI6324685, Length=207, Percent_Identity=30.9178743961353, Blast_Score=73, Evalue=3e-14,
Organism=Drosophila melanogaster, GI78706856, Length=202, Percent_Identity=40.5940594059406, Blast_Score=133, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3290_EUBR3 (C4ZDP0)

Other databases:

- EMBL:   CP001107
- RefSeq:   YP_002939150.1
- ProteinModelPortal:   C4ZDP0
- GeneID:   7964427
- GenomeReviews:   CP001107_GR
- KEGG:   ere:EUBREC_3290
- ProtClustDB:   CLSK2506165
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 22727; Mature: 22596

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: ACT_SITE 33-33

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIILASASPRRKELLEQIGAEFVVCPAKGEEIITEEEPSAVVMELSRQKAEEVASGVL
CCCEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TYNEQHAELVTPQDILVIGADTVVAYENQILGKPKDEEDARRMLSMLSGKTHSVYTGVTF
HCCCCCCEEECCCEEEEECCCEEEEECHHHCCCCCCHHHHHHHHHHHCCCCCEEEECEEE
VFIDKAGRTGEHCFYEKTDVSMYKLTEEEIDRYISSGDPMDKAGSYGIQGRFAIHIKGIH
EEEECCCCCCCCCEEECCCCHHEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEC
GDYNNVVGLPVARLYQELRKLGVDV
CCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQIILASASPRRKELLEQIGAEFVVCPAKGEEIITEEEPSAVVMELSRQKAEEVASGVL
CCEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TYNEQHAELVTPQDILVIGADTVVAYENQILGKPKDEEDARRMLSMLSGKTHSVYTGVTF
HCCCCCCEEECCCEEEEECCCEEEEECHHHCCCCCCHHHHHHHHHHHCCCCCEEEECEEE
VFIDKAGRTGEHCFYEKTDVSMYKLTEEEIDRYISSGDPMDKAGSYGIQGRFAIHIKGIH
EEEECCCCCCCCCEEECCCCHHEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEC
GDYNNVVGLPVARLYQELRKLGVDV
CCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA