| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925631
Identifier: 238925631
GI number: 238925631
Start: 3122599
End: 3123921
Strand: Reverse
Name: 238925631
Synonym: EUBREC_3288
Alternate gene names: NA
Gene position: 3123921-3122599 (Counterclockwise)
Preceding gene: 238925633
Following gene: 238925630
Centisome position: 90.56
GC content: 44.9
Gene sequence:
>1323_bases ATGCAGGATAAAAAGCAAAAAAAGGCAAAAATACAGGTTATATTTCTAATTCTTATTTCCACGCTTGTTATTTTAGCGGA TTTTTATGCGATAATTAATTATCCAAAGGAATACATGCTCATTGCAGCAATCACAGTTATCTTTATGATTTGTCTGTGGG GAGTGATAAGCGGATTTTTCTCACTGAGTGCTCTAAAGGAGGACAGGAGGGAGGAACAGTATGACAGTATTTTTAAGTCG GAAAAGGCATCTTACCTCATGCTTAGAAAGTATTTTGATGAGATAGAGGGAAAGATTGAGATACTGCAGAAGGAGTCAAA GATTCCGACTGAGGATATAATCAATGCACAGAAGGGAATCGCAAAGGTTGTTATCAACAGGAATAAGGAAAATGCTGATG CGATTATGAACTCTAATGAACAGCTTATGGAGACTTTTGAACATCTTGAGAATAAGCTCAAGGAGAGCAATGATTTCATT ATTGAGAGCCAGAAAAATGTGATTTATGATAACCTCAAGGACATTATGGAAAAGCAGCAGGTTCTGTCTGACAGCATAAA GGATATGGAAATCCGTCTGAGTCAGGCAATCACAGCAAATCCTATTCAGTTTACAGCAAATGTTGAGATGCCTAAGCAAA CGACCGACGCACCACAATCAGCACCGGCCATGGAGGCGATACCTGAACCGGAATCTGTACAAGCGAATGAGTCAGAACAG ATACCTGAGCCTATTCAGATAAATGAGCCGGAGCCTGTAGTTGAGGCACCACATGTACCTGAACCTGAATCGGTAGTAGA GCCAAGTCCTGTTGCAGAAGAAGCTGTTGCAGATACGACAAACAGCGATCCGAACCGCCAGCTGAGTGCAGATGAAATAG CAGCACTTTTTGCAAGTGCAAACGCAGGTGCGACAGAACCTGAATCAGATCCGGCAGAGGAAGTGATTACGGAACCGGTC ACAGAGGCACCACATGTACCTGAGCCGGAGCCAGTAGTAGAGCCAAGCCCTGCGGCAGAAGCTGTTACAGAGCCAAGCCC TGCGGCAGAAGCTGTTGCAGATACGACAAACAGTGACCCGAACCGCCAGCTGAGTGCAGATGAAATAGCAGCACTTTTTG CAAGTGCAAACGCAGGTGCGACAGAACCTGAATCAGAGCCGGCAGAGAAAGTGATTACGGAACCGGTCACAGAGGCACCT CAGGCACCTGAGCCGGAGCCTGTAAGTGAACCGGAACCTGCAAAGTCTCCGGTTGTAGATTTGAATAACACAAATCGTAA TCTGACACCGGATGAGATAGCAGCTTTATTTAGCAGTATGTAG
Upstream 100 bases:
>100_bases ATAGATACATTAAGATAAATGTACTGGGACTTGTATTATCCACAGCCGTCACGCGGTACGGCTGTCGCGGATAGCGTCAG GCCCCGGGAAGGGGAATTAT
Downstream 100 bases:
>100_bases TATTTTGGTAACTATTCAGTAAAGAAATATGCGGTATTGCATATTTCGTAAAAAATGAAGAAATAATATTTTGTAATTAT CTCACAAATATGTTAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MQDKKQKKAKIQVIFLILISTLVILADFYAIINYPKEYMLIAAITVIFMICLWGVISGFFSLSALKEDRREEQYDSIFKS EKASYLMLRKYFDEIEGKIEILQKESKIPTEDIINAQKGIAKVVINRNKENADAIMNSNEQLMETFEHLENKLKESNDFI IESQKNVIYDNLKDIMEKQQVLSDSIKDMEIRLSQAITANPIQFTANVEMPKQTTDAPQSAPAMEAIPEPESVQANESEQ IPEPIQINEPEPVVEAPHVPEPESVVEPSPVAEEAVADTTNSDPNRQLSADEIAALFASANAGATEPESDPAEEVITEPV TEAPHVPEPEPVVEPSPAAEAVTEPSPAAEAVADTTNSDPNRQLSADEIAALFASANAGATEPESEPAEKVITEPVTEAP QAPEPEPVSEPEPAKSPVVDLNNTNRNLTPDEIAALFSSM
Sequences:
>Translated_440_residues MQDKKQKKAKIQVIFLILISTLVILADFYAIINYPKEYMLIAAITVIFMICLWGVISGFFSLSALKEDRREEQYDSIFKS EKASYLMLRKYFDEIEGKIEILQKESKIPTEDIINAQKGIAKVVINRNKENADAIMNSNEQLMETFEHLENKLKESNDFI IESQKNVIYDNLKDIMEKQQVLSDSIKDMEIRLSQAITANPIQFTANVEMPKQTTDAPQSAPAMEAIPEPESVQANESEQ IPEPIQINEPEPVVEAPHVPEPESVVEPSPVAEEAVADTTNSDPNRQLSADEIAALFASANAGATEPESDPAEEVITEPV TEAPHVPEPEPVVEPSPAAEAVTEPSPAAEAVADTTNSDPNRQLSADEIAALFASANAGATEPESEPAEKVITEPVTEAP QAPEPEPVSEPEPAKSPVVDLNNTNRNLTPDEIAALFSSM >Mature_440_residues MQDKKQKKAKIQVIFLILISTLVILADFYAIINYPKEYMLIAAITVIFMICLWGVISGFFSLSALKEDRREEQYDSIFKS EKASYLMLRKYFDEIEGKIEILQKESKIPTEDIINAQKGIAKVVINRNKENADAIMNSNEQLMETFEHLENKLKESNDFI IESQKNVIYDNLKDIMEKQQVLSDSIKDMEIRLSQAITANPIQFTANVEMPKQTTDAPQSAPAMEAIPEPESVQANESEQ IPEPIQINEPEPVVEAPHVPEPESVVEPSPVAEEAVADTTNSDPNRQLSADEIAALFASANAGATEPESDPAEEVITEPV TEAPHVPEPEPVVEPSPAAEAVTEPSPAAEAVADTTNSDPNRQLSADEIAALFASANAGATEPESEPAEKVITEPVTEAP QAPEPEPVSEPEPAKSPVVDLNNTNRNLTPDEIAALFSSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48257; Mature: 48257
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKKQKKAKIQVIFLILISTLVILADFYAIINYPKEYMLIAAITVIFMICLWGVISGFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SLSALKEDRREEQYDSIFKSEKASYLMLRKYFDEIEGKIEILQKESKIPTEDIINAQKGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH AKVVINRNKENADAIMNSNEQLMETFEHLENKLKESNDFIIESQKNVIYDNLKDIMEKQQ HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH VLSDSIKDMEIRLSQAITANPIQFTANVEMPKQTTDAPQSAPAMEAIPEPESVQANESEQ HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHC IPEPIQINEPEPVVEAPHVPEPESVVEPSPVAEEAVADTTNSDPNRQLSADEIAALFASA CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC NAGATEPESDPAEEVITEPVTEAPHVPEPEPVVEPSPAAEAVTEPSPAAEAVADTTNSDP CCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCC NRQLSADEIAALFASANAGATEPESEPAEKVITEPVTEAPQAPEPEPVSEPEPAKSPVVD CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCEEE LNNTNRNLTPDEIAALFSSM CCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MQDKKQKKAKIQVIFLILISTLVILADFYAIINYPKEYMLIAAITVIFMICLWGVISGFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SLSALKEDRREEQYDSIFKSEKASYLMLRKYFDEIEGKIEILQKESKIPTEDIINAQKGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH AKVVINRNKENADAIMNSNEQLMETFEHLENKLKESNDFIIESQKNVIYDNLKDIMEKQQ HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH VLSDSIKDMEIRLSQAITANPIQFTANVEMPKQTTDAPQSAPAMEAIPEPESVQANESEQ HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHC IPEPIQINEPEPVVEAPHVPEPESVVEPSPVAEEAVADTTNSDPNRQLSADEIAALFASA CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC NAGATEPESDPAEEVITEPVTEAPHVPEPEPVVEPSPAAEAVTEPSPAAEAVADTTNSDP CCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCC NRQLSADEIAALFASANAGATEPESEPAEKVITEPVTEAPQAPEPEPVSEPEPAKSPVVD CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCEEE LNNTNRNLTPDEIAALFSSM CCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA