| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is cshA [H]
Identifier: 238925630
GI number: 238925630
Start: 3120850
End: 3122442
Strand: Reverse
Name: cshA [H]
Synonym: EUBREC_3287
Alternate gene names: 238925630
Gene position: 3122442-3120850 (Counterclockwise)
Preceding gene: 238925631
Following gene: 238925627
Centisome position: 90.51
GC content: 46.14
Gene sequence:
>1593_bases ATGGAAACAATCAGATTTGACGAATTAGAACTAAACCCTAAGATTTTGCGAGGCATCAAGGATATGGGCTTTGAGGAGGC AACTCCAATACAGGCTCAGGGAATCCCGGCAGTGCTTTCGGGCAGGGATGTAATCGGACAGGCGCAGACCGGAACAGGAA AGACAGCAGCCTTTGGTATTCCGGTGCTTGAGAGCGTTGATGCATCAAGTCACAAGACACAGGTTATCATCCTCTCTCCT ACAAGGGAGCTTGCCATCCAGGTGGCAGATGAAATCAGGAAGCTTGCAAAATATATGCATGGTGTGAAGGTACTTCCGGT ATACGGAGGACAGGATATCAGCCGCCAGATTAAGGCACTTAAGGGCGGTGTGCAGATTATTATCGGAACCCCGGGGCGTC TTATGGATCATCTCAGGAGAAAGACAATCAGGCCTGACCATGTAAAGACAATAGTGCTCGACGAGGCAGACGAGATGCTC AACATGGGCTTTAGGGAGGACATCGAGACAGTGCTCGAATACCTGCCACAGGAGCATCAGACAGTACTCTTCTCGGCAAC AATGCCAAAGCCTATTTTGGAAATTACAAGAAAATATCAGCATGATGCCATCAACATCAAGATTGTGAAAAAAGAGCTGA CAGTCGCAAATATCGACCAGTATTACTATGATGTGAAGCGCAAGGACAAGATAGATGTACTCACAAGACTGTTGGATTAC TATAATCCAAAGCTCTCACTTGTATTCTGCAACACCAAGAAGATGGTCGATGAGCTGGCATATGAGCTTTGCGGGCGCGG CTACAGTGCAGAGGGACTTCATGGCGATATGAAGCAGGTGCAGAGAGATCGTGTCATGAAGAACTTCAGAAACGGAAAGA CAGATATTCTTATTGCCACTGATGTCGCAGCGCGCGGAATTGATGTGGATGATGTGGAGGCTGTTTTTAATTATGATCTG CCTCAGGATGACGAGTATTATGTACATAGAATCGGCCGTACAGGAAGAGCAGGCCGCTGTGGAAAGGCATTCTCCTTTGT AAAGGGCAAGGAGGTATATAAGCTCAAGGACATACAGCGCTACTGCAAGACAAAAATCTATGCACAGCCAATTCCATCAT CTGATGATGTTGCCAAAATCAGGGCAGAAAAGATTATGGACCAGATTTCCACCATTATAGATGAGGAAAATCTCACAAGT GTCATTGATATTATAGAGAATCAGATAAATGAGTCAGATTACACAGCAATGGATATAGCGGCGGCATTTTTATACCAGGC TATGGGTGCTTCAGAGATATCCACAGCTGAATCAAAGGACGACTATGATTTCCACAATACAGGAGCAGAGGATGGCATGG TACGTCTGTTTATCAACGTAGGAAAGAAGGACAAGATAAAGCCGGGTGACATTTTAGGTGCCATTGCAGGCGAGTCAGGC ATGCCTGGCAGGCTTGTCGGTGCAATCGACATGTACGATAAGTATACATTTGTTGAGGTACCGGCTGAGTATGGCAAGGA AGTGCTTAATGCCATGAAGAATGCGAAGATAAAGGGCCGCTCTGTGAACATGGAGCCTGCAAATTCACGATAG
Upstream 100 bases:
>100_bases GAAGAAATAATATTTTGTAATTATCTCACAAATATGTTAAAGTGTGCATGTTATAAAAATATGCACACTTTATTTTTTTG AAAGGAAATATAAAAAATAT
Downstream 100 bases:
>100_bases CAAAGTCAGGCTTTTCTGATAACGCATCAGCTTTTCTTGTTCTCAGTGGTTCTGAATAGTTACGATGGTTGTATAAAAAA TACCGGGACACAAAAAGTGT
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLESVDASSHKTQVIILSP TRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKALKGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEML NMGFREDIETVLEYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIATDVAARGIDVDDVEAVFNYDL PQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQRYCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTS VIDIIENQINESDYTAMDIAAAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR
Sequences:
>Translated_530_residues METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLESVDASSHKTQVIILSP TRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKALKGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEML NMGFREDIETVLEYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIATDVAARGIDVDDVEAVFNYDL PQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQRYCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTS VIDIIENQINESDYTAMDIAAAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR >Mature_530_residues METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLESVDASSHKTQVIILSP TRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKALKGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEML NMGFREDIETVLEYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIATDVAARGIDVDDVEAVFNYDL PQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQRYCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTS VIDIIENQINESDYTAMDIAAAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=44.4743935309973, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=41.6666666666667, Blast_Score=284, Evalue=2e-76, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=41.9354838709677, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI164664518, Length=387, Percent_Identity=37.2093023255814, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI20149629, Length=387, Percent_Identity=35.4005167958656, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI301171475, Length=376, Percent_Identity=39.0957446808511, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=39.0957446808511, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=39.0957446808511, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=38.8297872340425, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=38.8297872340425, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI41327773, Length=343, Percent_Identity=39.067055393586, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=40.4011461318052, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI224593278, Length=418, Percent_Identity=34.688995215311, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=36.8131868131868, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=36.9014084507042, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI50659095, Length=404, Percent_Identity=34.4059405940594, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=38.1578947368421, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=36.4145658263305, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI4758112, Length=369, Percent_Identity=34.4173441734417, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI18375623, Length=369, Percent_Identity=34.4173441734417, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=38.0681818181818, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=38.0681818181818, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.4145658263305, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.4145658263305, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.4145658263305, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=34.6368715083799, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=36.9509043927649, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=36.6925064599483, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI45446747, Length=365, Percent_Identity=36.4383561643836, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI45446743, Length=365, Percent_Identity=36.4383561643836, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI31542656, Length=369, Percent_Identity=35.5013550135501, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI13129006, Length=405, Percent_Identity=33.5802469135802, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI188035877, Length=364, Percent_Identity=34.3406593406593, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI164419743, Length=398, Percent_Identity=33.4170854271357, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI51094101, Length=398, Percent_Identity=33.4170854271357, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=36.6310160427808, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=33.7988826815642, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=36.3881401617251, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=35.195530726257, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI256223453, Length=384, Percent_Identity=33.0729166666667, Blast_Score=209, Evalue=7e-54, Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=36.0795454545455, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI41327776, Length=387, Percent_Identity=32.0413436692506, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=36.676217765043, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI38327634, Length=398, Percent_Identity=32.9145728643216, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI38569503, Length=355, Percent_Identity=33.5211267605634, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569505, Length=355, Percent_Identity=33.5211267605634, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI17505907, Length=398, Percent_Identity=32.1608040201005, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=30.2267002518892, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=30.9090909090909, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI20336298, Length=354, Percent_Identity=30.5084745762712, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=30.7453416149068, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=29.2168674698795, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI154759257, Length=126, Percent_Identity=38.8888888888889, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI4557365, Length=365, Percent_Identity=24.1095890410959, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI51242943, Length=376, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI51242947, Length=376, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI148612816, Length=376, Percent_Identity=24.7340425531915, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87082221, Length=551, Percent_Identity=37.7495462794918, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI1787605, Length=373, Percent_Identity=43.4316353887399, Blast_Score=327, Evalue=9e-91, Organism=Escherichia coli, GI1787016, Length=390, Percent_Identity=40.2564102564103, Blast_Score=299, Evalue=3e-82, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=37.7358490566038, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=38.0555555555556, Blast_Score=221, Evalue=7e-59, Organism=Escherichia coli, GI48994977, Length=369, Percent_Identity=24.6612466124661, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=46.3611859838275, Blast_Score=336, Evalue=2e-92, Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=46.0916442048518, Blast_Score=335, Evalue=3e-92, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=41.8032786885246, Blast_Score=320, Evalue=8e-88, Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=35.9249329758713, Blast_Score=271, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17537549, Length=354, Percent_Identity=39.2655367231638, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=37.8947368421053, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=37.7049180327869, Blast_Score=241, Evalue=9e-64, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=37.7049180327869, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=37.6021798365123, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=37.4647887323944, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=39.4021739130435, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=39.5348837209302, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI86570094, Length=347, Percent_Identity=40.0576368876081, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71982858, Length=345, Percent_Identity=34.4927536231884, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=37.3983739837398, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=32.6424870466321, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=36.7977528089888, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.9459459459459, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=33.0578512396694, Blast_Score=212, Evalue=5e-55, Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=34.0482573726542, Blast_Score=212, Evalue=5e-55, Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=34.0482573726542, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17509811, Length=354, Percent_Identity=34.7457627118644, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17536099, Length=379, Percent_Identity=34.8284960422164, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17536101, Length=379, Percent_Identity=34.8284960422164, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=35.0140056022409, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17536103, Length=379, Percent_Identity=34.8284960422164, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=31.0924369747899, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=31.0924369747899, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=32.8571428571429, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=34.0659340659341, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=31.5789473684211, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17556951, Length=396, Percent_Identity=28.030303030303, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=33.2460732984293, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=36.6834170854271, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=26.525198938992, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=29.7157622739018, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI25148203, Length=409, Percent_Identity=27.1393643031785, Blast_Score=138, Evalue=9e-33, Organism=Caenorhabditis elegans, GI71997889, Length=367, Percent_Identity=28.3378746594005, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.4117647058824, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25148291, Length=431, Percent_Identity=24.3619489559165, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=49.5145631067961, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=26.1261261261261, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25145561, Length=422, Percent_Identity=23.4597156398104, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI32564293, Length=357, Percent_Identity=24.6498599439776, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320224, Length=373, Percent_Identity=42.0911528150134, Blast_Score=312, Evalue=8e-86, Organism=Saccharomyces cerevisiae, GI6322912, Length=377, Percent_Identity=41.3793103448276, Blast_Score=288, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6322323, Length=377, Percent_Identity=41.3793103448276, Blast_Score=288, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6320041, Length=378, Percent_Identity=38.3597883597884, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6324217, Length=350, Percent_Identity=40.2857142857143, Blast_Score=256, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=373, Percent_Identity=39.142091152815, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324620, Length=387, Percent_Identity=39.0180878552972, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=41.1594202898551, Blast_Score=246, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=38.9502762430939, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=37.3219373219373, Blast_Score=239, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=39.3854748603352, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=35.042735042735, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=35.1800554016621, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=33.4254143646409, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=32.6259946949602, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=415, Percent_Identity=32.289156626506, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=33.8666666666667, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=30.8988764044944, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=402, Percent_Identity=30.3482587064677, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=29.9043062200957, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=30.1790281329923, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320173, Length=228, Percent_Identity=33.7719298245614, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=402, Percent_Identity=27.363184079602, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=410, Percent_Identity=23.9024390243902, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322876, Length=182, Percent_Identity=30.2197802197802, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323844, Length=371, Percent_Identity=22.6415094339623, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=45.5525606469003, Blast_Score=333, Evalue=3e-91, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=36.9973190348526, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=36.9973190348526, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI28574962, Length=365, Percent_Identity=37.8082191780822, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=38.9204545454545, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=9e-65, Organism=Drosophila melanogaster, GI17985987, Length=395, Percent_Identity=37.4683544303797, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI18857967, Length=358, Percent_Identity=38.8268156424581, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24585582, Length=347, Percent_Identity=36.8876080691643, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=36.9014084507042, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=37.2549019607843, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=37.1830985915493, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=38.1201044386423, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=35.0132625994695, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI21356161, Length=418, Percent_Identity=34.4497607655502, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=35.4570637119114, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24581954, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI24581952, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI24581956, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=36.7292225201072, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI28571808, Length=352, Percent_Identity=34.9431818181818, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI28571809, Length=352, Percent_Identity=34.9431818181818, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=35.9872611464968, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=31.2328767123288, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI21355559, Length=412, Percent_Identity=30.5825242718447, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=29.2134831460674, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=29.2134831460674, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI24666101, Length=411, Percent_Identity=30.9002433090024, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI20130173, Length=441, Percent_Identity=29.9319727891156, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24643725, Length=387, Percent_Identity=29.1989664082687, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI24642822, Length=364, Percent_Identity=29.3956043956044, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=28.3333333333333, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24668515, Length=367, Percent_Identity=29.9727520435967, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=26.7139479905437, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24640164, Length=392, Percent_Identity=24.234693877551, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24646066, Length=361, Percent_Identity=25.7617728531856, Blast_Score=92, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 59379; Mature: 59379
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGI CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCCCEEECC PVLESVDASSHKTQVIILSPTRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKAL CHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH KGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEMLNMGFREDIETVLEYLPQEHQ CCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCCC TVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY EEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIAT CCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE DVAARGIDVDDVEAVFNYDLPQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQR CHHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH YCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTSVIDIIENQINESDYTAMDIA HHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH AAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCC MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR CCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCC >Mature Secondary Structure METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGI CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCCCEEECC PVLESVDASSHKTQVIILSPTRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKAL CHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH KGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEMLNMGFREDIETVLEYLPQEHQ CCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCCC TVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY EEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIAT CCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE DVAARGIDVDDVEAVFNYDLPQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQR CHHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH YCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTSVIDIIENQINESDYTAMDIA HHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH AAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCC MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR CCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]