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The map label for this gene is yabB [H]

Identifier: 238925616

GI number: 238925616

Start: 3107623

End: 3108381

Strand: Reverse

Name: yabB [H]

Synonym: EUBREC_3272

Alternate gene names: 238925616

Gene position: 3108381-3107623 (Counterclockwise)

Preceding gene: 238925617

Following gene: 238925615

Centisome position: 90.11

GC content: 48.22

Gene sequence:

>759_bases
ATGGAAGCACTGATACACAGTAATGAGCGACTGGACGATTTGTGCCGCAAGGGCTATAGGCTCATACAGGATCCAAAGCT
GTTCTGCTTCGGCATAGACGCCGTGCTTTTATCTGACTATGCAAAGGTAAAGCGCGGCGAGAAAGCTGTGGATTTGTGCA
CCGGAAACGGTGTGATTCCGATACTTCTTGAGGCAAAGAATAACGGAGAGCATTACAGCGGACTCGAGCTTCAGCCTCAG
TGCGCAGACCTGGCGAGAAGAAGTGTGAAATATAACCATCTTGAGGACAAAGTGACCATAGAAGAGGGCGATGTGTGCAA
GGCATCGGAGATTTTCGGTCGAGAGTCCGTGGAGGTGGTGACGGTAAATCCGCCGTATATGATAGGTCAGCACGGTATCA
AAAATGCAGACGATGCCATGACGATAGCACGCCACGAGGTCAGGTGTACACTTGACGATATAGTCAGGGAGAGCGCAAAA
ATGCTCAAATTCAATGGGCGTTTTTACATGGTTCACAGACCATTCAGGCTGGCAGAGATCTTTAGCACGATGATGAAATA
TCATATCGAGCCAAAGCGCATGCGCCTTGTGCATCCCTACGCGGACAGGGAGCCAAACATGGTGCTTATAGAGGGGTTAA
AGGGCGGCAAAAGCCGTATAACCATCGAAAAACCTTTAGTTGTATACAAGGAGCCTAATGTATACACGGATGAGATATAT
GAGATATACGGCGATAAGCCCCGGAATAACGGAAAATAA

Upstream 100 bases:

>100_bases
AAAAACAGACCAAACAAGCAGAAATACAACCGCAACAAGGATTACAAGAACAAAAACTATAATAAAGAGTATAATAAAGA
TTACAACAGGGACAAAGACA

Downstream 100 bases:

>100_bases
CAGGAGAATCATATGACAGGAACACTGTATTTGTGCGCAACTCCGATAGGAAATCTGGAGGACATCACATTCCGTGTGCT
GCGCACACTTAAGGAGGTAG

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEALIHSNERLDDLCRKGYRLIQDPKLFCFGIDAVLLSDYAKVKRGEKAVDLCTGNGVIPILLEAKNNGEHYSGLELQPQ
CADLARRSVKYNHLEDKVTIEEGDVCKASEIFGRESVEVVTVNPPYMIGQHGIKNADDAMTIARHEVRCTLDDIVRESAK
MLKFNGRFYMVHRPFRLAEIFSTMMKYHIEPKRMRLVHPYADREPNMVLIEGLKGGKSRITIEKPLVVYKEPNVYTDEIY
EIYGDKPRNNGK

Sequences:

>Translated_252_residues
MEALIHSNERLDDLCRKGYRLIQDPKLFCFGIDAVLLSDYAKVKRGEKAVDLCTGNGVIPILLEAKNNGEHYSGLELQPQ
CADLARRSVKYNHLEDKVTIEEGDVCKASEIFGRESVEVVTVNPPYMIGQHGIKNADDAMTIARHEVRCTLDDIVRESAK
MLKFNGRFYMVHRPFRLAEIFSTMMKYHIEPKRMRLVHPYADREPNMVLIEGLKGGKSRITIEKPLVVYKEPNVYTDEIY
EIYGDKPRNNGK
>Mature_252_residues
MEALIHSNERLDDLCRKGYRLIQDPKLFCFGIDAVLLSDYAKVKRGEKAVDLCTGNGVIPILLEAKNNGEHYSGLELQPQ
CADLARRSVKYNHLEDKVTIEEGDVCKASEIFGRESVEVVTVNPPYMIGQHGIKNADDAMTIARHEVRCTLDDIVRESAK
MLKFNGRFYMVHRPFRLAEIFSTMMKYHIEPKRMRLVHPYADREPNMVLIEGLKGGKSRITIEKPLVVYKEPNVYTDEIY
EIYGDKPRNNGK

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28862; Mature: 28862

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALIHSNERLDDLCRKGYRLIQDPKLFCFGIDAVLLSDYAKVKRGEKAVDLCTGNGVIP
CCCCCCCCCHHHHHHHHCCEECCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCEEE
ILLEAKNNGEHYSGLELQPQCADLARRSVKYNHLEDKVTIEEGDVCKASEIFGRESVEVV
EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHCCCCCEEEE
TVNPPYMIGQHGIKNADDAMTIARHEVRCTLDDIVRESAKMLKFNGRFYMVHRPFRLAEI
ECCCCEEECCCCCCCCCHHHHHHHHHEEECHHHHHHHHHHEEEECCEEEEEECCHHHHHH
FSTMMKYHIEPKRMRLVHPYADREPNMVLIEGLKGGKSRITIEKPLVVYKEPNVYTDEIY
HHHHHHHCCCHHHEEEECCCCCCCCCEEEEEECCCCCCEEEEECCEEEEECCCCCHHHHH
EIYGDKPRNNGK
HHCCCCCCCCCC
>Mature Secondary Structure
MEALIHSNERLDDLCRKGYRLIQDPKLFCFGIDAVLLSDYAKVKRGEKAVDLCTGNGVIP
CCCCCCCCCHHHHHHHHCCEECCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCEEE
ILLEAKNNGEHYSGLELQPQCADLARRSVKYNHLEDKVTIEEGDVCKASEIFGRESVEVV
EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHCCCCCEEEE
TVNPPYMIGQHGIKNADDAMTIARHEVRCTLDDIVRESAKMLKFNGRFYMVHRPFRLAEI
ECCCCEEECCCCCCCCCHHHHHHHHHEEECHHHHHHHHHHEEEECCEEEEEECCHHHHHH
FSTMMKYHIEPKRMRLVHPYADREPNMVLIEGLKGGKSRITIEKPLVVYKEPNVYTDEIY
HHHHHHHCCCHHHEEEECCCCCCCCCEEEEEECCCCCCEEEEECCEEEEECCCCCHHHHH
EIYGDKPRNNGK
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]