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The map label for this gene is rsmI [H]

Identifier: 238925615

GI number: 238925615

Start: 3106774

End: 3107610

Strand: Reverse

Name: rsmI [H]

Synonym: EUBREC_3271

Alternate gene names: 238925615

Gene position: 3107610-3106774 (Counterclockwise)

Preceding gene: 238925616

Following gene: 238925614

Centisome position: 90.08

GC content: 50.3

Gene sequence:

>837_bases
ATGACAGGAACACTGTATTTGTGCGCAACTCCGATAGGAAATCTGGAGGACATCACATTCCGTGTGCTGCGCACACTTAA
GGAGGTAGACCTCATCGCAGCAGAGGATACGAGAAACTCCATAAAGCTGCTCAATCATTTTGAGATAAAGACACCCATGA
CGAGCTATCATGAGTTTAACAAGATAGATAAAGCTTACCAGCTTGTGGCAAAGCTTAAGGAGGGCAAAAATATAGCCCTC
ATCACTGATGCCGGAACACCCGGCATTTCTGACCCGGGTGAGGATATTGTGCGCATCTGCTACGAGGAGGGCGTGCCTGT
TACCTCGCTTCCCGGGGCGGCAGCGTGTATTACAGCGCTCACCATGTCGGGCAGGCCGACAAGGAGGTTTGCGTTTGAGG
CATTTTTGCCGAGGGATAAAAAGGAACGCGCGCGCGTCATTGAGGAGCTTAAAAAAGAGACCCGGACAATCATAATCTAC
GAGGCGCCTCATCATCTTATAAAGACGGTCACGGAGCTTTACAATGCGCTCGGAGACAGAGAACTCACCGTGTGCAGGGA
GCTTACGAAAAAGCACGAGGAAAAGGTGCAGACTACATTTTCGGAGCTTTTGGAGCGTTCAAGGACACAGGAGCCAAGAG
GCGAATATGTGCTTGTAATTTGTGGCAGAAACGTGGCTGAAATTGCAAAGGAGCAGCAGGAAAGCTGGGAAGCCATGCCT
CTTGAAGAGCATATGGCACACTATGAGTCACAGGGCATCGACAGGAAGGAAGCCATGAAGCTCGTGGCAAAGGACAGAGG
TGTCAGCAAGAGGGACATATACAGACAGCTTCTGTGA

Upstream 100 bases:

>100_bases
ACCTTTAGTTGTATACAAGGAGCCTAATGTATACACGGATGAGATATATGAGATATACGGCGATAAGCCCCGGAATAACG
GAAAATAACAGGAGAATCAT

Downstream 100 bases:

>100_bases
GCTGACAATAATACATTCTGCAGCAAATAGTTAGGATTGGATATGAACGATATAAAACATGACATAAAAAAACGACATAA
GAACCTGACAGAGTTCAGAT

Product: tetrapyrrole (corrin/porphyrin) methylase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTGTLYLCATPIGNLEDITFRVLRTLKEVDLIAAEDTRNSIKLLNHFEIKTPMTSYHEFNKIDKAYQLVAKLKEGKNIAL
ITDAGTPGISDPGEDIVRICYEEGVPVTSLPGAAACITALTMSGRPTRRFAFEAFLPRDKKERARVIEELKKETRTIIIY
EAPHHLIKTVTELYNALGDRELTVCRELTKKHEEKVQTTFSELLERSRTQEPRGEYVLVICGRNVAEIAKEQQESWEAMP
LEEHMAHYESQGIDRKEAMKLVAKDRGVSKRDIYRQLL

Sequences:

>Translated_278_residues
MTGTLYLCATPIGNLEDITFRVLRTLKEVDLIAAEDTRNSIKLLNHFEIKTPMTSYHEFNKIDKAYQLVAKLKEGKNIAL
ITDAGTPGISDPGEDIVRICYEEGVPVTSLPGAAACITALTMSGRPTRRFAFEAFLPRDKKERARVIEELKKETRTIIIY
EAPHHLIKTVTELYNALGDRELTVCRELTKKHEEKVQTTFSELLERSRTQEPRGEYVLVICGRNVAEIAKEQQESWEAMP
LEEHMAHYESQGIDRKEAMKLVAKDRGVSKRDIYRQLL
>Mature_277_residues
TGTLYLCATPIGNLEDITFRVLRTLKEVDLIAAEDTRNSIKLLNHFEIKTPMTSYHEFNKIDKAYQLVAKLKEGKNIALI
TDAGTPGISDPGEDIVRICYEEGVPVTSLPGAAACITALTMSGRPTRRFAFEAFLPRDKKERARVIEELKKETRTIIIYE
APHHLIKTVTELYNALGDRELTVCRELTKKHEEKVQTTFSELLERSRTQEPRGEYVLVICGRNVAEIAKEQQESWEAMPL
EEHMAHYESQGIDRKEAMKLVAKDRGVSKRDIYRQLL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=228, Percent_Identity=46.0526315789474, Blast_Score=194, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31692; Mature: 31561

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTLYLCATPIGNLEDITFRVLRTLKEVDLIAAEDTRNSIKLLNHFEIKTPMTSYHEFN
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
KIDKAYQLVAKLKEGKNIALITDAGTPGISDPGEDIVRICYEEGVPVTSLPGAAACITAL
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
TMSGRPTRRFAFEAFLPRDKKERARVIEELKKETRTIIIYEAPHHLIKTVTELYNALGDR
HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCC
ELTVCRELTKKHEEKVQTTFSELLERSRTQEPRGEYVLVICGRNVAEIAKEQQESWEAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
LEEHMAHYESQGIDRKEAMKLVAKDRGVSKRDIYRQLL
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure 
TGTLYLCATPIGNLEDITFRVLRTLKEVDLIAAEDTRNSIKLLNHFEIKTPMTSYHEFN
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
KIDKAYQLVAKLKEGKNIALITDAGTPGISDPGEDIVRICYEEGVPVTSLPGAAACITAL
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
TMSGRPTRRFAFEAFLPRDKKERARVIEELKKETRTIIIYEAPHHLIKTVTELYNALGDR
HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCC
ELTVCRELTKKHEEKVQTTFSELLERSRTQEPRGEYVLVICGRNVAEIAKEQQESWEAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
LEEHMAHYESQGIDRKEAMKLVAKDRGVSKRDIYRQLL
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]