Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238925594
Identifier: 238925594
GI number: 238925594
Start: 3088654
End: 3090501
Strand: Reverse
Name: 238925594
Synonym: EUBREC_3250
Alternate gene names: NA
Gene position: 3090501-3088654 (Counterclockwise)
Preceding gene: 238925595
Following gene: 238925593
Centisome position: 89.59
GC content: 31.11
Gene sequence:
>1848_bases ATGGAGAATAATCTAGAATTAAAATATAATAAATTGATATACAACTATCCATACTTAAAAGAAATAGTTTCAGATTGTGA TGAAAGCGATGTCTGTACAGCAAAATCGCTGGATGAAAAAATAATATATGGGATAGTGAAAAATGGTCATACATACTATC TTGATAGCAAGTATAGCGTGGATAATGAGTGTGAGCATATACTTAGGTCAAGTAAGGCAGAAAAAAATCCATTTGCAGTT TTTATAATTTTTGGGTTGGGAAATGGAATGTTGGTTCGCAAGATTAGAGAAAGATTTCCTGATAATTACATTTATGTTCA TGAACCATCTGAAAAAATTTTCCATAAATTCATGGAAACCGTAGAAGACATAGATTTTATTATAGATGAGCATGTGGTTA TAACTGTAGGTGAAAAAACAAGAGGAGCCAGAATAGAAGTATTGCATGAGATGGTAGATATTAATAATTTTTACATTACA GATGTAATTTGTATGCCACAATATAGAAATCTTATGATTGACGATTATCTTCTTTTCTTGAATGATTTTTACGCAAGAAT TGAACAGATTATCATGCAGAAAAATACGGATATTGCATTTAATGGAGAGCATATCGAGAATTTCTGGCACAATATATTAG ATTTAATTGATCAATATGGTGTAAAAGATTTAATAAAAAATATAGAAAACGAAAATAAAGAGGGATATCCGGCATTTATA GTATCTGCTGGACCATCACTTGATAAAAATATAGATATGTTAAAGGAGGTCAAAGGAAGAGGAATGATAATGGCAGTTGA TACAGCAATAAAGCCATTATTAAAAAAAGGTATAGTACCTGATATTGTTGCTTCTGTTGATCCACATAAACCTCTGGAAT TGTTTCAATATAGAGGAACAGAAAACCTTCCTATGCTGGTTGACATAAATTATAATTCGAAGATTGATTTGCTACATAAT GGTAAGAGATTTTATACATGGAGTGGTGAACCATTTGTGAAAGAGTTTTTGGAGAAAATGGGTATTGACCTTGGAGTGAT TGAAAGCGGGGGATCTGTAGCTTGTAATTTGTTTTCACTTGCTATAATGTCAAAATTTGAAACTATTGTTTTGATAGGGC AGGATTTGGCTTATCCTAATAAAAAAGGGCATTCTTCAGCTTCTTATGATAGCGAGAGTAATATTGATATAGAAAGTGGT AAGTACTTTAAAGTAGAAGATATATATGGAAATCATGTTTACACAGAAGGAAACATGAATGCATATAGGAAATGGTTTGA AGCAACTATATCAAGAAATCCTAGTATAAGATTTATTGATGCCACAGAAGGTGGTGCGAAAATAAAGGGGACAGAAATAA TGACACTTAGCAGTGCGATTAATGAGTGCTGTAATAAGTTATCAGAAAAGAAATGGATTAAAATTGTAAATGACTGTCCA AAGCTAATGAATAAAGAACAAAGAAAACAGGCAATTGAAATACTTGGAAAGATGCCACAGAACTTAGAATATTTGAAGGA AATGTTGGATGATGGAATGGAAACGATAGAAAGGATAAGAAATAATAAGGGAGAGCTAGAAAATGACGAGATTAAAAAAA ATATTCAGGAGATAATGGAAATTAACTCTGTGCTACAGGATAGTCTTGAAGCAAAAATATTGGGAATGTATAATGCTGAA ACTGGATATACAGTAGCAATGTCTGCATATAGAGTTAAAGAAGATATCAAAAGTGATGTGGATGATATAGTAAAAATGTG TGAAATGTCATATAAAGGATACTTACAGGCAATTGAAAATATGCAGGTTGATTATAATAACTACATTGATTTAACAAAGT TAAACTAA
Upstream 100 bases:
>100_bases TTAGATGCAATTGATTTGAAAGATCCAATACAAATTGTTGATACGCTTGAATATGAAATAAAAGAAAGCTTTGTGGTATA TAAAGAACTGGTGTATAAAT
Downstream 100 bases:
>100_bases AATATTAACTTTTATAGTATAATGTCGATATATAATAATATAAGAGATTCATGAAGAATCGTTAAGGTGCATGGAGGCAT AAATTTATATCGGATGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MENNLELKYNKLIYNYPYLKEIVSDCDESDVCTAKSLDEKIIYGIVKNGHTYYLDSKYSVDNECEHILRSSKAEKNPFAV FIIFGLGNGMLVRKIRERFPDNYIYVHEPSEKIFHKFMETVEDIDFIIDEHVVITVGEKTRGARIEVLHEMVDINNFYIT DVICMPQYRNLMIDDYLLFLNDFYARIEQIIMQKNTDIAFNGEHIENFWHNILDLIDQYGVKDLIKNIENENKEGYPAFI VSAGPSLDKNIDMLKEVKGRGMIMAVDTAIKPLLKKGIVPDIVASVDPHKPLELFQYRGTENLPMLVDINYNSKIDLLHN GKRFYTWSGEPFVKEFLEKMGIDLGVIESGGSVACNLFSLAIMSKFETIVLIGQDLAYPNKKGHSSASYDSESNIDIESG KYFKVEDIYGNHVYTEGNMNAYRKWFEATISRNPSIRFIDATEGGAKIKGTEIMTLSSAINECCNKLSEKKWIKIVNDCP KLMNKEQRKQAIEILGKMPQNLEYLKEMLDDGMETIERIRNNKGELENDEIKKNIQEIMEINSVLQDSLEAKILGMYNAE TGYTVAMSAYRVKEDIKSDVDDIVKMCEMSYKGYLQAIENMQVDYNNYIDLTKLN
Sequences:
>Translated_615_residues MENNLELKYNKLIYNYPYLKEIVSDCDESDVCTAKSLDEKIIYGIVKNGHTYYLDSKYSVDNECEHILRSSKAEKNPFAV FIIFGLGNGMLVRKIRERFPDNYIYVHEPSEKIFHKFMETVEDIDFIIDEHVVITVGEKTRGARIEVLHEMVDINNFYIT DVICMPQYRNLMIDDYLLFLNDFYARIEQIIMQKNTDIAFNGEHIENFWHNILDLIDQYGVKDLIKNIENENKEGYPAFI VSAGPSLDKNIDMLKEVKGRGMIMAVDTAIKPLLKKGIVPDIVASVDPHKPLELFQYRGTENLPMLVDINYNSKIDLLHN GKRFYTWSGEPFVKEFLEKMGIDLGVIESGGSVACNLFSLAIMSKFETIVLIGQDLAYPNKKGHSSASYDSESNIDIESG KYFKVEDIYGNHVYTEGNMNAYRKWFEATISRNPSIRFIDATEGGAKIKGTEIMTLSSAINECCNKLSEKKWIKIVNDCP KLMNKEQRKQAIEILGKMPQNLEYLKEMLDDGMETIERIRNNKGELENDEIKKNIQEIMEINSVLQDSLEAKILGMYNAE TGYTVAMSAYRVKEDIKSDVDDIVKMCEMSYKGYLQAIENMQVDYNNYIDLTKLN >Mature_615_residues MENNLELKYNKLIYNYPYLKEIVSDCDESDVCTAKSLDEKIIYGIVKNGHTYYLDSKYSVDNECEHILRSSKAEKNPFAV FIIFGLGNGMLVRKIRERFPDNYIYVHEPSEKIFHKFMETVEDIDFIIDEHVVITVGEKTRGARIEVLHEMVDINNFYIT DVICMPQYRNLMIDDYLLFLNDFYARIEQIIMQKNTDIAFNGEHIENFWHNILDLIDQYGVKDLIKNIENENKEGYPAFI VSAGPSLDKNIDMLKEVKGRGMIMAVDTAIKPLLKKGIVPDIVASVDPHKPLELFQYRGTENLPMLVDINYNSKIDLLHN GKRFYTWSGEPFVKEFLEKMGIDLGVIESGGSVACNLFSLAIMSKFETIVLIGQDLAYPNKKGHSSASYDSESNIDIESG KYFKVEDIYGNHVYTEGNMNAYRKWFEATISRNPSIRFIDATEGGAKIKGTEIMTLSSAINECCNKLSEKKWIKIVNDCP KLMNKEQRKQAIEILGKMPQNLEYLKEMLDDGMETIERIRNNKGELENDEIKKNIQEIMEINSVLQDSLEAKILGMYNAE TGYTVAMSAYRVKEDIKSDVDDIVKMCEMSYKGYLQAIENMQVDYNNYIDLTKLN
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70829; Mature: 70829
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNLELKYNKLIYNYPYLKEIVSDCDESDVCTAKSLDEKIIYGIVKNGHTYYLDSKYSV CCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCEEEEECCCCCC DNECEHILRSSKAEKNPFAVFIIFGLGNGMLVRKIRERFPDNYIYVHEPSEKIFHKFMET CHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH VEDIDFIIDEHVVITVGEKTRGARIEVLHEMVDINNFYITDVICMPQYRNLMIDDYLLFL HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHCCHHHHHHHHHH NDFYARIEQIIMQKNTDIAFNGEHIENFWHNILDLIDQYGVKDLIKNIENENKEGYPAFI HHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE VSAGPSLDKNIDMLKEVKGRGMIMAVDTAIKPLLKKGIVPDIVASVDPHKPLELFQYRGT EECCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCCCC ENLPMLVDINYNSKIDLLHNGKRFYTWSGEPFVKEFLEKMGIDLGVIESGGSVACNLFSL CCCCEEEEECCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHH AIMSKFETIVLIGQDLAYPNKKGHSSASYDSESNIDIESGKYFKVEDIYGNHVYTEGNMN HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCEEEECCCHH AYRKWFEATISRNPSIRFIDATEGGAKIKGTEIMTLSSAINECCNKLSEKKWIKIVNDCP HHHHHHHHHHCCCCCEEEEECCCCCCEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH KLMNKEQRKQAIEILGKMPQNLEYLKEMLDDGMETIERIRNNKGELENDEIKKNIQEIME HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH INSVLQDSLEAKILGMYNAETGYTVAMSAYRVKEDIKSDVDDIVKMCEMSYKGYLQAIEN HHHHHHHHHCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MQVDYNNYIDLTKLN CCCCCCCEEEEEECC >Mature Secondary Structure MENNLELKYNKLIYNYPYLKEIVSDCDESDVCTAKSLDEKIIYGIVKNGHTYYLDSKYSV CCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCEEEEECCCCCC DNECEHILRSSKAEKNPFAVFIIFGLGNGMLVRKIRERFPDNYIYVHEPSEKIFHKFMET CHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH VEDIDFIIDEHVVITVGEKTRGARIEVLHEMVDINNFYITDVICMPQYRNLMIDDYLLFL HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHCCHHHHHHHHHH NDFYARIEQIIMQKNTDIAFNGEHIENFWHNILDLIDQYGVKDLIKNIENENKEGYPAFI HHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE VSAGPSLDKNIDMLKEVKGRGMIMAVDTAIKPLLKKGIVPDIVASVDPHKPLELFQYRGT EECCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCCCC ENLPMLVDINYNSKIDLLHNGKRFYTWSGEPFVKEFLEKMGIDLGVIESGGSVACNLFSL CCCCEEEEECCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHH AIMSKFETIVLIGQDLAYPNKKGHSSASYDSESNIDIESGKYFKVEDIYGNHVYTEGNMN HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCEEEECCCHH AYRKWFEATISRNPSIRFIDATEGGAKIKGTEIMTLSSAINECCNKLSEKKWIKIVNDCP HHHHHHHHHHCCCCCEEEEECCCCCCEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH KLMNKEQRKQAIEILGKMPQNLEYLKEMLDDGMETIERIRNNKGELENDEIKKNIQEIME HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH INSVLQDSLEAKILGMYNAETGYTVAMSAYRVKEDIKSDVDDIVKMCEMSYKGYLQAIEN HHHHHHHHHCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MQVDYNNYIDLTKLN CCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA