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The map label for this gene is idi [C]

Identifier: 238925542

GI number: 238925542

Start: 3044082

End: 3044630

Strand: Reverse

Name: idi [C]

Synonym: EUBREC_3198

Alternate gene names: 238925542

Gene position: 3044630-3044082 (Counterclockwise)

Preceding gene: 238925543

Following gene: 238925541

Centisome position: 88.26

GC content: 48.45

Gene sequence:

>549_bases
ATGGAATATTTTGATATAGTGGACGAGCAGGGAAATCCAACAGGACAGACCGTAGAGCGCAAGCAGGCGCACAGAAACAA
TATACTTCATAGGACTGCGCATGTCTGGATAGTCAGACGCCGTGGAAATTCCATACAGATACTTTTGCAGAAAAGGTGCA
TGGAAAAAGACTCCTTTCCGGGCTGCTACGACATATCAAGTGCGGGACACATACCGGCCGGTGTGGACTATATACCGTCT
GCGCTCAGAGAGCTTAGGGAGGAGCTGGGCCTGACAATAGAGCCCAAACAGCTTATCGATTGTGGACTGCACAGACACCA
TGCAGACGAGGTGTTTCACGGAGAAAGATTCCTGGACAACCAGATAAGCAAGGTATTTCTTTTGTGGCTCGATGTGGACG
AAGCGGATATCACAGTGCAGAAGGAGGAAATCGACTCTGTAAAGTGGTTTGACTACGCAGAGTGTAAGCAGGACGTGATA
GACGGCACGATTCCAAACTGCATAGATGTGGCTGAGCTTGAGATGCTTGAGCCACACTTTATAGAATGA

Upstream 100 bases:

>100_bases
ATGCAGAGGGCAATCTCGCACTCCTGACACCGGAGAAGCCAATGCCGGCAGGAGCACCTATTGAGTGATCCGGACGTAAG
CGACAAGAAAGGAGTCTCAT

Downstream 100 bases:

>100_bases
AATTTTTGTGAAATAATCATAAAAATATATTTTACGTTAAATCAAATTGGGAGGATACTATGAAATCAACAAAAGACTCT
CTCTTAGAGGATATCAAGGC

Product: hydrolase of MutT (Nudix) family

Products: Dimethylallyl diphosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRRRGNSIQILLQKRCMEKDSFPGCYDISSAGHIPAGVDYIPS
ALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDNQISKVFLLWLDVDEADITVQKEEIDSVKWFDYAECKQDVI
DGTIPNCIDVAELEMLEPHFIE

Sequences:

>Translated_182_residues
MEYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRRRGNSIQILLQKRCMEKDSFPGCYDISSAGHIPAGVDYIPS
ALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDNQISKVFLLWLDVDEADITVQKEEIDSVKWFDYAECKQDVI
DGTIPNCIDVAELEMLEPHFIE
>Mature_182_residues
MEYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRRRGNSIQILLQKRCMEKDSFPGCYDISSAGHIPAGVDYIPS
ALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDNQISKVFLLWLDVDEADITVQKEEIDSVKWFDYAECKQDVI
DGTIPNCIDVAELEMLEPHFIE

Specific function: Catalyzes The 1,3-Allylic Rearrangement Of The Homoallylic Substrate Isopentenyl (Ipp) To Its Highly Electrophilic Allylic Isomer, Dimethylallyl Diphosphate (Dmapp). [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 5.3.3.2 [C]

Molecular weight: Translated: 21067; Mature: 21067

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRRRGNSIQILLQKRCMEKDSFP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEHHHHHHHCCCCCCC
GCYDISSAGHIPAGVDYIPSALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDN
CEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QISKVFLLWLDVDEADITVQKEEIDSVKWFDYAECKQDVIDGTIPNCIDVAELEMLEPHF
HHHEEEEEEEECCCCCEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
IE
CC
>Mature Secondary Structure
MEYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRRRGNSIQILLQKRCMEKDSFP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEHHHHHHHCCCCCCC
GCYDISSAGHIPAGVDYIPSALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDN
CEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QISKVFLLWLDVDEADITVQKEEIDSVKWFDYAECKQDVIDGTIPNCIDVAELEMLEPHF
HHHEEEEEEEECCCCCEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
IE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.036 {isopentenyl} [C]

Substrates: Isopentenyl diphosphate [C]

Specific reaction: Isopentenyl diphosphate --> Dimethylallyl diphosphate [C]

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: Iodoacetamide; PCMB [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]