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The map label for this gene is selD

Identifier: 238925503

GI number: 238925503

Start: 3010125

End: 3011153

Strand: Reverse

Name: selD

Synonym: EUBREC_3159

Alternate gene names: 238925503

Gene position: 3011153-3010125 (Counterclockwise)

Preceding gene: 238925504

Following gene: 238925502

Centisome position: 87.29

GC content: 48.49

Gene sequence:

>1029_bases
ATGCCACAGGAAATAGTGTTTTGCAAGGGCGGTGGCTGTACCGCAAAGCTTGGTCCGGATTTGTTAAGTCATGTTTTAGC
AAAGCTGCCAAGGGGTGAAAAAGACAGCAATCTGCTCATCGGATATGATAGCTGTGATGATGCGGCAGTGTACAAAATTT
CAGATGACACGGCGGTAGTCCAGACGCTTGATTTTTTTCCGCCGATGGTTGATGATCCGTATACGTTTGGACAGATAGCG
GCTGCAAATGCGCTCAGTGATATCTATGCGATGGGCGGCACAGTAAAGACCGCATTGAACATCGTCTGTTTCCCTGAGAA
AATGGATCTGAATATACTTGGCAAAATAATGCAGGGCGGTGCCGATAAGGTGATAGAGGCCGGCGGCACACTTGCGGGCG
GCCATTCTATAGCAGACAGTGATGTAAAATACGGACTTTCAGTCATGGGTACGGTCCACCCGGAGCATATTTACAGCAAC
AATACAGGGCAGCCGTCAGATGTGCTTATACTTACAAAGAAACTCGGAGTGGGGCTTGTATGCAACGCAAACCGCGTCGG
GGAAGCTCCGTTAGGTGCAATTGAGGATGCGGTAAGCTCTATGACCACACTGAATAAGGCAGCATCCGAAATCAGTCATG
CTTTCGATATACATGCATGCACGGATGTCACGGGATTTAGCTTTTTAGGGCATCTGAGTGAGATGTTAAATGATGATATA
ACAGCACTTATCGACTCGATTTCCATCCCGGTCATTACCGGAGCACTGCGATGCGCAGATGAGTTTTTCCTCACGGCAGC
GGCCCAGCGCAACAGAAACCATGTAGGTGATAAGGTGTGCTTTGCAAAAAATATACCTTTTTCAATGGAGGAGGTACTTT
TCGATCCGCAGACCTCCGGAGGATTGCTGTTTGCAGTAAAAGCCTCTGAGGCAGATGCATTTTTGCATGAGCTTAAAGCC
GCAGGGCTCCCGGCTGCAAAGGTGGGACGATTTGTTAAGCGTCGCGATGTGCCGATATATGTGAACTGA

Upstream 100 bases:

>100_bases
CATATTATAATACAGTTGATGAGATAAATGAGGCCGCTGAAGCGCTTATGCAGATTGCGGCATTGCGATAAATAGTATTA
AACAATTGAAAGGAGCAAAA

Downstream 100 bases:

>100_bases
TTTTAAGCTGCCATAGCTTATGCAAATTTGCTGACAGGCTGCATGCCCGGCTTTTGAGGGCTGACGAGTTGAAATAACAT
AGGGAGGATTATAAATATGA

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPQEIVFCKGGGCTAKLGPDLLSHVLAKLPRGEKDSNLLIGYDSCDDAAVYKISDDTAVVQTLDFFPPMVDDPYTFGQIA
AANALSDIYAMGGTVKTALNIVCFPEKMDLNILGKIMQGGADKVIEAGGTLAGGHSIADSDVKYGLSVMGTVHPEHIYSN
NTGQPSDVLILTKKLGVGLVCNANRVGEAPLGAIEDAVSSMTTLNKAASEISHAFDIHACTDVTGFSFLGHLSEMLNDDI
TALIDSISIPVITGALRCADEFFLTAAAQRNRNHVGDKVCFAKNIPFSMEEVLFDPQTSGGLLFAVKASEADAFLHELKA
AGLPAAKVGRFVKRRDVPIYVN

Sequences:

>Translated_342_residues
MPQEIVFCKGGGCTAKLGPDLLSHVLAKLPRGEKDSNLLIGYDSCDDAAVYKISDDTAVVQTLDFFPPMVDDPYTFGQIA
AANALSDIYAMGGTVKTALNIVCFPEKMDLNILGKIMQGGADKVIEAGGTLAGGHSIADSDVKYGLSVMGTVHPEHIYSN
NTGQPSDVLILTKKLGVGLVCNANRVGEAPLGAIEDAVSSMTTLNKAASEISHAFDIHACTDVTGFSFLGHLSEMLNDDI
TALIDSISIPVITGALRCADEFFLTAAAQRNRNHVGDKVCFAKNIPFSMEEVLFDPQTSGGLLFAVKASEADAFLHELKA
AGLPAAKVGRFVKRRDVPIYVN
>Mature_341_residues
PQEIVFCKGGGCTAKLGPDLLSHVLAKLPRGEKDSNLLIGYDSCDDAAVYKISDDTAVVQTLDFFPPMVDDPYTFGQIAA
ANALSDIYAMGGTVKTALNIVCFPEKMDLNILGKIMQGGADKVIEAGGTLAGGHSIADSDVKYGLSVMGTVHPEHIYSNN
TGQPSDVLILTKKLGVGLVCNANRVGEAPLGAIEDAVSSMTTLNKAASEISHAFDIHACTDVTGFSFLGHLSEMLNDDIT
ALIDSISIPVITGALRCADEFFLTAAAQRNRNHVGDKVCFAKNIPFSMEEVLFDPQTSGGLLFAVKASEADAFLHELKAA
GLPAAKVGRFVKRRDVPIYVN

Specific function: Synthesizes selenophosphate from selenide and ATP

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily

Homologues:

Organism=Homo sapiens, GI24797148, Length=347, Percent_Identity=28.5302593659942, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI15011844, Length=323, Percent_Identity=28.4829721362229, Blast_Score=109, Evalue=3e-24,
Organism=Escherichia coli, GI1788062, Length=335, Percent_Identity=37.6119402985075, Blast_Score=186, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17543426, Length=351, Percent_Identity=27.3504273504274, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24653602, Length=299, Percent_Identity=30.4347826086957, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24653604, Length=299, Percent_Identity=30.4347826086957, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI28574119, Length=330, Percent_Identity=30.6060606060606, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI28574118, Length=243, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SELD_EUBR3 (C4ZDB0)

Other databases:

- EMBL:   CP001107
- RefSeq:   YP_002939020.1
- GeneID:   7965177
- GenomeReviews:   CP001107_GR
- KEGG:   ere:EUBREC_3159
- ProtClustDB:   CLSK2506148
- HAMAP:   MF_00625
- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061
- PIRSF:   PIRSF036407
- TIGRFAMs:   TIGR00476

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like

EC number: =2.7.9.3

Molecular weight: Translated: 36212; Mature: 36081

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: ACT_SITE 13-13

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQEIVFCKGGGCTAKLGPDLLSHVLAKLPRGEKDSNLLIGYDSCDDAAVYKISDDTAVV
CCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCHHHH
QTLDFFPPMVDDPYTFGQIAAANALSDIYAMGGTVKTALNIVCFPEKMDLNILGKIMQGG
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCHHHHHHHHHCC
ADKVIEAGGTLAGGHSIADSDVKYGLSVMGTVHPEHIYSNNTGQPSDVLILTKKLGVGLV
HHHHHHCCCCCCCCCCCCCCHHHHCHHEEECCCHHHHCCCCCCCCCEEEEEEECCCEEEE
CNANRVGEAPLGAIEDAVSSMTTLNKAASEISHAFDIHACTDVTGFSFLGHLSEMLNDDI
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHCCHH
TALIDSISIPVITGALRCADEFFLTAAAQRNRNHVGDKVCFAKNIPFSMEEVLFDPQTSG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHCCCCCCC
GLLFAVKASEADAFLHELKAAGLPAAKVGRFVKRRDVPIYVN
CEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure 
PQEIVFCKGGGCTAKLGPDLLSHVLAKLPRGEKDSNLLIGYDSCDDAAVYKISDDTAVV
CCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCHHHH
QTLDFFPPMVDDPYTFGQIAAANALSDIYAMGGTVKTALNIVCFPEKMDLNILGKIMQGG
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCHHHHHHHHHCC
ADKVIEAGGTLAGGHSIADSDVKYGLSVMGTVHPEHIYSNNTGQPSDVLILTKKLGVGLV
HHHHHHCCCCCCCCCCCCCCHHHHCHHEEECCCHHHHCCCCCCCCCEEEEEEECCCEEEE
CNANRVGEAPLGAIEDAVSSMTTLNKAASEISHAFDIHACTDVTGFSFLGHLSEMLNDDI
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHCCHH
TALIDSISIPVITGALRCADEFFLTAAAQRNRNHVGDKVCFAKNIPFSMEEVLFDPQTSG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHCCCCCCC
GLLFAVKASEADAFLHELKAAGLPAAKVGRFVKRRDVPIYVN
CEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA