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The map label for this gene is spoVT [H]

Identifier: 238925496

GI number: 238925496

Start: 3004026

End: 3004499

Strand: Reverse

Name: spoVT [H]

Synonym: EUBREC_3152

Alternate gene names: 238925496

Gene position: 3004499-3004026 (Counterclockwise)

Preceding gene: 238925497

Following gene: 238925495

Centisome position: 87.09

GC content: 44.73

Gene sequence:

>474_bases
ATGCTGCATATAAAAGAGGGAAGCCCACTGGAAATATATATGGATGCGGACGAGACGATAGTGCTAAAGAAGTATTCGCA
GGTTGGAAGCCTGAAGAATATATCACAGGCATATGCACAGAGCCTGTCAAAGGTAACAGGAGCCATGGTATGTGTGGCGG
ATAGGGATGAGATAATAGCAGCAGCCGGCAAAAACCACAAAAATTATATAGGCAAGGCTTTGTCAAAAGAACTCGAGAAT
ATTATGGATAAGAGAAAAAGTGCATTGTACAGTAAAAAAGACGATACCCTGATACCTGTGGTAAAGGACGATAAAGCTGA
CTGTGAAGCGCAGGCAATAGCAGTAATAGTGCATGATGGTGATAGCGCGGGAGCCGTTATACTGTGTGTTTACGATGAAA
AAGCCGATAAGTCTGAGATTGCCGAAAAGCTGGCGGGTGCAGCAGCAGAATTTCTGGCTGACCAGCTTGGCTAG

Upstream 100 bases:

>100_bases
TGCAAAAAAGTAACCGGAGGACAATAAAGTGAAAATCACAGGATTGACCAGAAGAGTAGATTCCCTCGGCAGAATAGTTA
TACCAAAGGAGCTTCGCAGG

Downstream 100 bases:

>100_bases
AGATAGCAAAAAGCAATGTAAAAACTATTTACTTGACTACAACAGTAATAAAGATGTAAAATAGCTTGATAAAGGGAGCA
ATTAGCTTCCTTTTGTGCTA

Product: stage V sprulation protein T

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLHIKEGSPLEIYMDADETIVLKKYSQVGSLKNISQAYAQSLSKVTGAMVCVADRDEIIAAAGKNHKNYIGKALSKELEN
IMDKRKSALYSKKDDTLIPVVKDDKADCEAQAIAVIVHDGDSAGAVILCVYDEKADKSEIAEKLAGAAAEFLADQLG

Sequences:

>Translated_157_residues
MLHIKEGSPLEIYMDADETIVLKKYSQVGSLKNISQAYAQSLSKVTGAMVCVADRDEIIAAAGKNHKNYIGKALSKELEN
IMDKRKSALYSKKDDTLIPVVKDDKADCEAQAIAVIVHDGDSAGAVILCVYDEKADKSEIAEKLAGAAAEFLADQLG
>Mature_157_residues
MLHIKEGSPLEIYMDADETIVLKKYSQVGSLKNISQAYAQSLSKVTGAMVCVADRDEIIAAAGKNHKNYIGKALSKELEN
IMDKRKSALYSKKDDTLIPVVKDDKADCEAQAIAVIVHDGDSAGAVILCVYDEKADKSEIAEKLAGAAAEFLADQLG

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 16889; Mature: 16889

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIKEGSPLEIYMDADETIVLKKYSQVGSLKNISQAYAQSLSKVTGAMVCVADRDEIIA
CEECCCCCCEEEEECCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEE
AAGKNHKNYIGKALSKELENIMDKRKSALYSKKDDTLIPVVKDDKADCEAQAIAVIVHDG
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEECC
DSAGAVILCVYDEKADKSEIAEKLAGAAAEFLADQLG
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHIKEGSPLEIYMDADETIVLKKYSQVGSLKNISQAYAQSLSKVTGAMVCVADRDEIIA
CEECCCCCCEEEEECCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEE
AAGKNHKNYIGKALSKELENIMDKRKSALYSKKDDTLIPVVKDDKADCEAQAIAVIVHDG
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEECC
DSAGAVILCVYDEKADKSEIAEKLAGAAAEFLADQLG
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]