| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is bceR [H]
Identifier: 238925431
GI number: 238925431
Start: 2951006
End: 2951677
Strand: Reverse
Name: bceR [H]
Synonym: EUBREC_3086
Alternate gene names: 238925431
Gene position: 2951677-2951006 (Counterclockwise)
Preceding gene: 238925432
Following gene: 238925430
Centisome position: 85.56
GC content: 43.01
Gene sequence:
>672_bases ATGTATAGAATATTTTTGGTTGAGGATGACGAGACCATAGCAAAGCTTGTCAGAAGACATTTGGAAAAATGGGATTATGA TGTGCATGTGGTGCAGAAATTTGATGCTGTAATGTCAGAATTTGCATCATTTGATCCGCAGCTTGTGCTTATGGATATCG GTCTGCCGTTTTACAATGGGTATCACTGGTGTACGGAAATCAGAAGGGTATCAAAGGTTCCTGTGGTTTTCCTGTCATCC GCTGCTGATAATATGAATATAGTGATGGCAGTCAGTATGGGGGCAGACGACTTTATAGCAAAGCCGTTTGACCTCGATGT GCTGACCGTAAAGATACAGGCTATCATCAGGCGCTGCTATGATTTTGGCGCAAATAACAGTGTTTTGGAGCATAATGGCG CCATGCTCAATATATCTGATGCCACCATAACCTATGACGACAAAAGGCTCGAGCTTACAAAGAATGAGCTCAAAATATTG CAGACACTTTTTGACAATAAAGAAAGGATTGTATCACGCAGCCTTCTAATGGAAAAGCTGTGGGAGAGTGATGCGTATGT GGACGAGAATACACTTTCGGTGAATGTCAACAGGCTGCGTAAAAAGCTGGATTCTATAGGGCTTGAGAGCTTTATTGTCA CAAAAAAGGGGCTTGGGTACAGGCTGGGGTGA
Upstream 100 bases:
>100_bases TGATTCCAAAGGCACAGCTCAAGCCGGATTTACTTCGTATGAAGGCATCACAGCTCATCATCGATGCGGCTGAGATTATC ATGGAAGAAAGCGAAAAATA
Downstream 100 bases:
>100_bases GAGGTCATGGCAAAAATACAAAACAAACCGCATCTGACAAATTTTATAAAACAAAACTATATATGGATTTTGATGATAGT CACAATGACCTGTATCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MYRIFLVEDDETIAKLVRRHLEKWDYDVHVVQKFDAVMSEFASFDPQLVLMDIGLPFYNGYHWCTEIRRVSKVPVVFLSS AADNMNIVMAVSMGADDFIAKPFDLDVLTVKIQAIIRRCYDFGANNSVLEHNGAMLNISDATITYDDKRLELTKNELKIL QTLFDNKERIVSRSLLMEKLWESDAYVDENTLSVNVNRLRKKLDSIGLESFIVTKKGLGYRLG
Sequences:
>Translated_223_residues MYRIFLVEDDETIAKLVRRHLEKWDYDVHVVQKFDAVMSEFASFDPQLVLMDIGLPFYNGYHWCTEIRRVSKVPVVFLSS AADNMNIVMAVSMGADDFIAKPFDLDVLTVKIQAIIRRCYDFGANNSVLEHNGAMLNISDATITYDDKRLELTKNELKIL QTLFDNKERIVSRSLLMEKLWESDAYVDENTLSVNVNRLRKKLDSIGLESFIVTKKGLGYRLG >Mature_223_residues MYRIFLVEDDETIAKLVRRHLEKWDYDVHVVQKFDAVMSEFASFDPQLVLMDIGLPFYNGYHWCTEIRRVSKVPVVFLSS AADNMNIVMAVSMGADDFIAKPFDLDVLTVKIQAIIRRCYDFGANNSVLEHNGAMLNISDATITYDDKRLELTKNELKIL QTLFDNKERIVSRSLLMEKLWESDAYVDENTLSVNVNRLRKKLDSIGLESFIVTKKGLGYRLG
Specific function: Member of the two-component regulatory system BceS/BceR involved in the regulation of bacitracin resistance. When activated by BceS, binds to the upstream region of the bceAB promoter and up-regulates the expression of these two genes [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=30.4932735426009, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=29.4117647058824, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=28.6363636363636, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=25.6756756756757, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=32.7433628318584, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=27.0642201834862, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=28.1938325991189, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=26.6375545851528, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=26.4957264957265, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=27.8026905829596, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=25.4464285714286, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=27.3127753303965, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=27.1493212669683, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=29.4642857142857, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25684; Mature: 25684
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRIFLVEDDETIAKLVRRHLEKWDYDVHVVQKFDAVMSEFASFDPQLVLMDIGLPFYNG CEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC YHWCTEIRRVSKVPVVFLSSAADNMNIVMAVSMGADDFIAKPFDLDVLTVKIQAIIRRCY HHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHH DFGANNSVLEHNGAMLNISDATITYDDKRLELTKNELKILQTLFDNKERIVSRSLLMEKL HCCCCCCEEECCCCEEEECCCEEEECCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH WESDAYVDENTLSVNVNRLRKKLDSIGLESFIVTKKGLGYRLG HCCCCCCCCCEEEEEHHHHHHHHHHCCCHHEEEECCCCCCCCC >Mature Secondary Structure MYRIFLVEDDETIAKLVRRHLEKWDYDVHVVQKFDAVMSEFASFDPQLVLMDIGLPFYNG CEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC YHWCTEIRRVSKVPVVFLSSAADNMNIVMAVSMGADDFIAKPFDLDVLTVKIQAIIRRCY HHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHH DFGANNSVLEHNGAMLNISDATITYDDKRLELTKNELKILQTLFDNKERIVSRSLLMEKL HCCCCCCEEECCCCEEEECCCEEEECCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH WESDAYVDENTLSVNVNRLRKKLDSIGLESFIVTKKGLGYRLG HCCCCCCCCCEEEEEHHHHHHHHHHCCCHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]