Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238925378
Identifier: 238925378
GI number: 238925378
Start: 2908917
End: 2909273
Strand: Reverse
Name: 238925378
Synonym: EUBREC_3033
Alternate gene names: NA
Gene position: 2909273-2908917 (Counterclockwise)
Preceding gene: 238925379
Following gene: 238925377
Centisome position: 84.33
GC content: 40.34
Gene sequence:
>357_bases ATGAAGGTTTGGAAATTAGTTTCAGGTATTTTATCAATAATTTTATTTGTTTTTGTATCATTTCAGTCATGCGCTGCAGG AGTATCTAATGCATTGGAGGCCAATGGTGAGGCATCAGGAAGTGCAGGAATAATTGTGGCAATTCTTATGCTTGCAGGTG GAATTGTTTCAATCGCTACGAGAAAATCGTTAGGCAAGGGTGGGAATATCGCACTCATAGTACTCTTTGGATTGGCAGCA ATTATCGGATTTGCGGGTTATGGAAGTTTTTCAGATCTGGCTATATGGGCAGGCTGGTGTCTGATAAATGCAGTTCTTGC GGTAGTTGCACTGGTTATGGCAAAGAAGAACAATTAA
Upstream 100 bases:
>100_bases ATAACATTTACGGCACAGTAAATAATTTAAACATCATATGAAAGTATGATTATTAAACAGTAGAGCTACGCAATATTTAA ATAGATAGGAGAAATTCATC
Downstream 100 bases:
>100_bases ATATTACTATTTGAATTCATATGAGGAAGATTCTAAGGAGAATCTTCCTTTTTTGATATTTAAACTAAGACTAAATATGA TACAATTCAATTATTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKVWKLVSGILSIILFVFVSFQSCAAGVSNALEANGEASGSAGIIVAILMLAGGIVSIATRKSLGKGGNIALIVLFGLAA IIGFAGYGSFSDLAIWAGWCLINAVLAVVALVMAKKNN
Sequences:
>Translated_118_residues MKVWKLVSGILSIILFVFVSFQSCAAGVSNALEANGEASGSAGIIVAILMLAGGIVSIATRKSLGKGGNIALIVLFGLAA IIGFAGYGSFSDLAIWAGWCLINAVLAVVALVMAKKNN >Mature_118_residues MKVWKLVSGILSIILFVFVSFQSCAAGVSNALEANGEASGSAGIIVAILMLAGGIVSIATRKSLGKGGNIALIVLFGLAA IIGFAGYGSFSDLAIWAGWCLINAVLAVVALVMAKKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11957; Mature: 11957
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVWKLVSGILSIILFVFVSFQSCAAGVSNALEANGEASGSAGIIVAILMLAGGIVSIAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHH RKSLGKGGNIALIVLFGLAAIIGFAGYGSFSDLAIWAGWCLINAVLAVVALVMAKKNN HHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVWKLVSGILSIILFVFVSFQSCAAGVSNALEANGEASGSAGIIVAILMLAGGIVSIAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHH RKSLGKGGNIALIVLFGLAAIIGFAGYGSFSDLAIWAGWCLINAVLAVVALVMAKKNN HHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA