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The map label for this gene is yvaA [H]

Identifier: 238925229

GI number: 238925229

Start: 2761588

End: 2762652

Strand: Reverse

Name: yvaA [H]

Synonym: EUBREC_2883

Alternate gene names: 238925229

Gene position: 2762652-2761588 (Counterclockwise)

Preceding gene: 238925230

Following gene: 238925228

Centisome position: 80.08

GC content: 46.76

Gene sequence:

>1065_bases
ATGAGAGAAAACAAAGTAGTTTACGGACTAATCGGATATGGCGGTATGGGCAGATGGCATACCGAGATTCTTTCAAATGT
TCCAGAAGCTGTAATTGGTGGTATCTATGACATCAAGGAAGAAAAGAGAGAAGAAGCGAAAGCGAAGGGGTTTTCTGTAT
ATGAAACAGAAGAAGCCATGCTGGCAGATTCGGACATCGATGTGGTTCTGATTGCCACTCCAAATGACTGCCACAAGCCT
ATCGCTATCCGTGCAATGCATGCAGGAAAAAACGTGATATCGGAAAAACCGGTGACATTATCTTCCGCTGACCTGCTGGA
AATGGAAAAGGTAGCCAAAGAGACAGGAAAACTTTTCACCGTGCACCAGAATAGACGTTGGGATGATGATTTCCTGATCA
TCAAAAAACTGGTAGAGGAGCAGAAACTGGGGCATGTTTTCCGGATCGAGAGCCGTGTCCATGGTTCAAGAGGAATCCCT
GGGGACTGGAGAAAAGAAAAGGTACATGGGGGCGGAATGGTCCTGGACTGGGGTGTACACCTGCTGGATCAGATTTTATA
TATGTACGGAGATAGAAAGATCGAGACGGTATACGCGTCACTTACCAATATCACAAACCAGGAAGTGGACGATGGGTTCA
CTGCTATTCTGACCTTTGAAGGCGGAACAGAAGTCCTGGTGGAAGTCGGCACCAACAATTATATATCACTGCCAAGATGG
TATGTACTGGGTAAAGACGGTACCGCAGTAATCAGGGACTGGCAGTTAACCGGTGAGATTATACGTAAGACCGGTAAGAC
AGAAGAGACGGTAATACCGGTTAAGACAGCAGCTGGCCTGACAAAGACCATGGCACCGAGACGGGAAGATACTATTGTAA
AAGAGGATTTACCAAAGGTGTCCGGAGATATCGCTGATTTCCACAGAAATGTGGTTGCAGTAATCCGAGATGGAGCAGAG
CCGGAGATCAAGCTGTTCCAGGTGATGCGTGTCATGAAGTTGATGGAGGCAATCTTCCAGGCGGCAGAGACAAAACAGGT
AATCGAATTTCAGGACCAGGTGTAA

Upstream 100 bases:

>100_bases
GCGACCAGATTCTCAAAGAAATCAACGATGAATTAAGTAAGTAAAAAAGACAGCGGCTGATGGTGTTCTTCAGCCGCTGT
TTTTACGATGGAGGTATAAA

Downstream 100 bases:

>100_bases
CAGGAAAGGCATTGAGTAGTTATAACATAAAAATAAAAGACAGTTGTACATGTTCTTTGAGAGTGCATGTAACAGAACAG
GAGGAAATAAGTATGAAACA

Product: hypothetical oxidoreductase YdgJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRENKVVYGLIGYGGMGRWHTEILSNVPEAVIGGIYDIKEEKREEAKAKGFSVYETEEAMLADSDIDVVLIATPNDCHKP
IAIRAMHAGKNVISEKPVTLSSADLLEMEKVAKETGKLFTVHQNRRWDDDFLIIKKLVEEQKLGHVFRIESRVHGSRGIP
GDWRKEKVHGGGMVLDWGVHLLDQILYMYGDRKIETVYASLTNITNQEVDDGFTAILTFEGGTEVLVEVGTNNYISLPRW
YVLGKDGTAVIRDWQLTGEIIRKTGKTEETVIPVKTAAGLTKTMAPRREDTIVKEDLPKVSGDIADFHRNVVAVIRDGAE
PEIKLFQVMRVMKLMEAIFQAAETKQVIEFQDQV

Sequences:

>Translated_354_residues
MRENKVVYGLIGYGGMGRWHTEILSNVPEAVIGGIYDIKEEKREEAKAKGFSVYETEEAMLADSDIDVVLIATPNDCHKP
IAIRAMHAGKNVISEKPVTLSSADLLEMEKVAKETGKLFTVHQNRRWDDDFLIIKKLVEEQKLGHVFRIESRVHGSRGIP
GDWRKEKVHGGGMVLDWGVHLLDQILYMYGDRKIETVYASLTNITNQEVDDGFTAILTFEGGTEVLVEVGTNNYISLPRW
YVLGKDGTAVIRDWQLTGEIIRKTGKTEETVIPVKTAAGLTKTMAPRREDTIVKEDLPKVSGDIADFHRNVVAVIRDGAE
PEIKLFQVMRVMKLMEAIFQAAETKQVIEFQDQV
>Mature_354_residues
MRENKVVYGLIGYGGMGRWHTEILSNVPEAVIGGIYDIKEEKREEAKAKGFSVYETEEAMLADSDIDVVLIATPNDCHKP
IAIRAMHAGKNVISEKPVTLSSADLLEMEKVAKETGKLFTVHQNRRWDDDFLIIKKLVEEQKLGHVFRIESRVHGSRGIP
GDWRKEKVHGGGMVLDWGVHLLDQILYMYGDRKIETVYASLTNITNQEVDDGFTAILTFEGGTEVLVEVGTNNYISLPRW
YVLGKDGTAVIRDWQLTGEIIRKTGKTEETVIPVKTAAGLTKTMAPRREDTIVKEDLPKVSGDIADFHRNVVAVIRDGAE
PEIKLFQVMRVMKLMEAIFQAAETKQVIEFQDQV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI9506675, Length=208, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081947, Length=213, Percent_Identity=33.8028169014084, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1789848, Length=344, Percent_Identity=27.906976744186, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082405, Length=276, Percent_Identity=26.4492753623188, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787574, Length=165, Percent_Identity=29.0909090909091, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24581117, Length=255, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39796; Mature: 39796

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRENKVVYGLIGYGGMGRWHTEILSNVPEAVIGGIYDIKEEKREEAKAKGFSVYETEEAM
CCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCEEEECCHHH
LADSDIDVVLIATPNDCHKPIAIRAMHAGKNVISEKPVTLSSADLLEMEKVAKETGKLFT
EECCCCCEEEEECCCCCCCCEEEEEECCCCHHHCCCCCEECCHHHHHHHHHHHHCCCEEE
VHQNRRWDDDFLIIKKLVEEQKLGHVFRIESRVHGSRGIPGDWRKEKVHGGGMVLDWGVH
EECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHCCCCCEEEHHHHH
LLDQILYMYGDRKIETVYASLTNITNQEVDDGFTAILTFEGGTEVLVEVGTNNYISLPRW
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECCEE
YVLGKDGTAVIRDWQLTGEIIRKTGKTEETVIPVKTAAGLTKTMAPRREDTIVKEDLPKV
EEECCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEHHHCCCHHHCCCCCCCCHHHHHCCHH
SGDIADFHRNVVAVIRDGAEPEIKLFQVMRVMKLMEAIFQAAETKQVIEFQDQV
CCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRENKVVYGLIGYGGMGRWHTEILSNVPEAVIGGIYDIKEEKREEAKAKGFSVYETEEAM
CCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCEEEECCHHH
LADSDIDVVLIATPNDCHKPIAIRAMHAGKNVISEKPVTLSSADLLEMEKVAKETGKLFT
EECCCCCEEEEECCCCCCCCEEEEEECCCCHHHCCCCCEECCHHHHHHHHHHHHCCCEEE
VHQNRRWDDDFLIIKKLVEEQKLGHVFRIESRVHGSRGIPGDWRKEKVHGGGMVLDWGVH
EECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHCCCCCEEEHHHHH
LLDQILYMYGDRKIETVYASLTNITNQEVDDGFTAILTFEGGTEVLVEVGTNNYISLPRW
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECCEE
YVLGKDGTAVIRDWQLTGEIIRKTGKTEETVIPVKTAAGLTKTMAPRREDTIVKEDLPKV
EEECCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEHHHCCCHHHCCCCCCCCHHHHHCCHH
SGDIADFHRNVVAVIRDGAEPEIKLFQVMRVMKLMEAIFQAAETKQVIEFQDQV
CCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]