Click here to switch to the map view.

The map label for this gene is cynT [C]

Identifier: 238922380

GI number: 238922380

Start: 585795

End: 586355

Strand: Reverse

Name: cynT [C]

Synonym: EUBELI_20616

Alternate gene names: 238922380

Gene position: 586355-585795 (Counterclockwise)

Preceding gene: 238922381

Following gene: 238922379

Centisome position: 93.56

GC content: 42.96

Gene sequence:

>561_bases
ATGTCAATACCAGCACATGAAGCAAAGTCAAGATTAATAGAGGGTAATAAAAGATTTATTAATGCTACAAGCAATCCAGG
AGATGTTTCGCTGGAAAGGCGCGTGGATACATTAAAGAATGGTCAGCATCCATATGCGATTGTTCTGTGCTGTTCGGATT
CCAGACAGGTACCGGAAGCAATATTCTCAGCGGGAATAGGGGAACTTTTTGTTATCCGCGTGGCAGGAAATGTAGTGGAT
TCGCATCAGCTTGGAAGTATTGAATATGCAGCAGACCATCTTGACTGTAAGCTGGTGGTTGTACTTGGACATAACCATTG
CGGTGCAGTTGAGGCGGCAATAAAGCATGACCCCGACGGACATATCAAGTATATAACTGACGATATCAGGGAAGCTATTA
AGGAAGAGAAAGATGAGTATATTGCAACATGTCTTAATGTAAAGCATAGTGTCAAGGTGATAGAGGATAATACAGATATG
AAGCTGCTTGAGGAAAAGGGTCTTGAGGTTATCGGGGCTGTGTACCATCTTGAGGACGGGCATGTGGAGTTTTTGGAGTA
A

Upstream 100 bases:

>100_bases
GAACTGATAAGAAAGAGCCTCCTTATAAGGAAGAGATTGCGTGGCTGCTTAAAGATTAATAAACTGTAGGAAAGTATGTT
GTGAAAGGCGGGATAATAAT

Downstream 100 bases:

>100_bases
AGAATGGATGAATGTAACATTATCAGACTAAATAATTTAATATCGTATATATCCCCAACAGAGAATCCACTATCTGCAAA
TGTGGTGATGATACAGGGAA

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSIPAHEAKSRLIEGNKRFINATSNPGDVSLERRVDTLKNGQHPYAIVLCCSDSRQVPEAIFSAGIGELFVIRVAGNVVD
SHQLGSIEYAADHLDCKLVVVLGHNHCGAVEAAIKHDPDGHIKYITDDIREAIKEEKDEYIATCLNVKHSVKVIEDNTDM
KLLEEKGLEVIGAVYHLEDGHVEFLE

Sequences:

>Translated_186_residues
MSIPAHEAKSRLIEGNKRFINATSNPGDVSLERRVDTLKNGQHPYAIVLCCSDSRQVPEAIFSAGIGELFVIRVAGNVVD
SHQLGSIEYAADHLDCKLVVVLGHNHCGAVEAAIKHDPDGHIKYITDDIREAIKEEKDEYIATCLNVKHSVKVIEDNTDM
KLLEEKGLEVIGAVYHLEDGHVEFLE
>Mature_185_residues
SIPAHEAKSRLIEGNKRFINATSNPGDVSLERRVDTLKNGQHPYAIVLCCSDSRQVPEAIFSAGIGELFVIRVAGNVVDS
HQLGSIEYAADHLDCKLVVVLGHNHCGAVEAAIKHDPDGHIKYITDDIREAIKEEKDEYIATCLNVKHSVKVIEDNTDMK
LLEEKGLEVIGAVYHLEDGHVEFLE

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=164, Percent_Identity=32.3170731707317, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 20535; Mature: 20404

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPAHEAKSRLIEGNKRFINATSNPGDVSLERRVDTLKNGQHPYAIVLCCSDSRQVPEA
CCCCHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
IFSAGIGELFVIRVAGNVVDSHQLGSIEYAADHLDCKLVVVLGHNHCGAVEAAIKHDPDG
HHHCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCC
HIKYITDDIREAIKEEKDEYIATCLNVKHSVKVIEDNTDMKLLEEKGLEVIGAVYHLEDG
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEEEEEEECCC
HVEFLE
CEEECC
>Mature Secondary Structure 
SIPAHEAKSRLIEGNKRFINATSNPGDVSLERRVDTLKNGQHPYAIVLCCSDSRQVPEA
CCCHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
IFSAGIGELFVIRVAGNVVDSHQLGSIEYAADHLDCKLVVVLGHNHCGAVEAAIKHDPDG
HHHCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCC
HIKYITDDIREAIKEEKDEYIATCLNVKHSVKVIEDNTDMKLLEEKGLEVIGAVYHLEDG
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEEEEEEECCC
HVEFLE
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA