| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is 238922368
Identifier: 238922368
GI number: 238922368
Start: 575902
End: 576438
Strand: Reverse
Name: 238922368
Synonym: EUBELI_20604
Alternate gene names: NA
Gene position: 576438-575902 (Counterclockwise)
Preceding gene: 238922369
Following gene: 238922367
Centisome position: 91.97
GC content: 35.57
Gene sequence:
>537_bases ATGTTTGCATTAAAAGATTATATTACATCTGAGGATATTAAGAATCTGCGAAAGAATCTTGGACTGACACAGAAAGAATT TGCCAGTCTTGTAGGAACATCGAAACCGACAATAGAACGATGGGAAAAAGAAAATGCTAAGATTACAGGTCCAATTGTTT TACTTTCTAAGATGATTAATGATTATCCTGATTATGTGAACAGACTGATAATACCGGAGAAAGAATTTCCTGTCAGAATG TTTTATATGTATAAGGATGACATCTGTACACTGATAGATGTTGATGACGCAAAGCAGCTTGTGAGAATAAAGAATTATAC AGACAAGCTGATGTTTCGTGCATTTGGCGTTAATGAAAATCCTGATTACAATGACTATAAGGAATTTCTTGAGTCAAGAT GTTTTCCAAGAACAAGAGATAAGATGAAGCTTGTGCTGGAGGATATCGGACTTCCGTTTTATGACACATTTATGATAATA GAAAAGACGCAGGGGCGTATGGCAGAGGACGATTTCTGGATAAGAATAGAGAAGTAG
Upstream 100 bases:
>100_bases CCATCATTTTAACGACTTTTTGTTTACAATAAAATGTGTACATGGTACACTTGGGTTATGAAAAGTCATTATTTATCAAG GACTGAAAGGAAGTGACACA
Downstream 100 bases:
>100_bases ATGATGGAGGAATGTTTATGGTTGAACTTTTTAAACAGAATATAAAAACCAATATCAGACAGTCATCTAAGGGAAACCAG TTAAAATGGGAAAACGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MFALKDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPDYVNRLIIPEKEFPVRM FYMYKDDICTLIDVDDAKQLVRIKNYTDKLMFRAFGVNENPDYNDYKEFLESRCFPRTRDKMKLVLEDIGLPFYDTFMII EKTQGRMAEDDFWIRIEK
Sequences:
>Translated_178_residues MFALKDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPDYVNRLIIPEKEFPVRM FYMYKDDICTLIDVDDAKQLVRIKNYTDKLMFRAFGVNENPDYNDYKEFLESRCFPRTRDKMKLVLEDIGLPFYDTFMII EKTQGRMAEDDFWIRIEK >Mature_178_residues MFALKDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPDYVNRLIIPEKEFPVRM FYMYKDDICTLIDVDDAKQLVRIKNYTDKLMFRAFGVNENPDYNDYKEFLESRCFPRTRDKMKLVLEDIGLPFYDTFMII EKTQGRMAEDDFWIRIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21228; Mature: 21228
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALKDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMIN CCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEHHHHHHHHHHHH DYPDYVNRLIIPEKEFPVRMFYMYKDDICTLIDVDDAKQLVRIKNYTDKLMFRAFGVNEN HHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC PDYNDYKEFLESRCFPRTRDKMKLVLEDIGLPFYDTFMIIEKTQGRMAEDDFWIRIEK CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCEEEEEEC >Mature Secondary Structure MFALKDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMIN CCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEHHHHHHHHHHHH DYPDYVNRLIIPEKEFPVRMFYMYKDDICTLIDVDDAKQLVRIKNYTDKLMFRAFGVNEN HHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC PDYNDYKEFLESRCFPRTRDKMKLVLEDIGLPFYDTFMIIEKTQGRMAEDDFWIRIEK CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA