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The map label for this gene is ftsY [H]

Identifier: 238921553

GI number: 238921553

Start: 3592081

End: 3593754

Strand: Reverse

Name: ftsY [H]

Synonym: NT01EI_3705

Alternate gene names: 238921553

Gene position: 3593754-3592081 (Counterclockwise)

Preceding gene: 238921556

Following gene: 238921552

Centisome position: 94.27

GC content: 60.57

Gene sequence:

>1674_bases
ATGGCAAAAGATAAGAAACGTGGATTTTTCTCCTGGCTGGGATTTGGCCGACAGCAGGAAGATCAGCCTCAGGAGCACGC
ACCCGAGCAGGTGCTGGATCGCGAGCCCGAGCAGGCAGTTCCTGCCGCCGATCCCGCGTCTGTTTCCAAACCTTGCGCAG
AGATAGCCCCCGCCGAGAAGCCGGCGCTTGACATCATGCCCGCCGTGACGATGCTTACTGCAGAGCAGGCAGAGCAGGCA
GAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGC
AGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGG
CAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAG
GCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGGCAGAGCAGATGGCGCAGGAGATCATCGTCGCCCGCGCGGCCGC
CATGGCAACCGCGGCGCTGGATGTCTCCCCGGTATCCACCGAGGATTCGGTGGTAGAGACGTCGGCGGTGGCGCCTATCG
TTGATCTGGCCGAGGTTGCACGCTCGCAAGAGACCGCCGATCTGCAGGATATCGACGCGGAAGAGGAGGCGTCGCCCGCG
CCGATCAGCGTGCGTGAGCAGGAGAAGCCGGTGAAGGAGGGCTTCTTTGCCCGCCTGAAGCGTAGCTTGGTTAAGACGCG
TCAAAATCTGGGATCCGGCTTTTTTAGCCTGTTCCGCGGCAAAAAAATCGATGACGATCTGTTCGATGAGTTGGAAGAGC
AGCTTATCGTGGCCGACGTCGGCGTGGAGACCACGCGCAAGATCATCGACTCGCTGACCGCCCACGCCAGCCGCAAAGAG
CTGAAAGATGCCGAAGCGCTGTACGGTAAGCTGAAGGAGGAGATGGGCGAGATCCTGCAGAAGGTGGATGCACCGCTGGA
TATCAGCGGGCATCAGCCCTTCGTTATTTTAATGGTTGGCGTTAATGGCGTGGGTAAAACCACCACCATCGGCAAGCTGG
CCCGCCAGTTCCAGGCGCAGGGGAAATCAGTGATGCTGGCAGCGGGTGACACCTTCCGTGCGGCGGCGGTGGAGCAGCTG
CAGGTCTGGGGCGAGCGTAACCATATTTCGGTGATTGCCCAGCATACCGGCGCCGATTCGGCCTCGGTGATTTTCGATGC
GATCCAGGCGGCGAAAGCGCGTAAAGTGGACGTTCTGATCGCTGATACAGCGGGGCGTCTGCAGAATAAATCACACCTGA
TGGAAGAGCTGAAAAAAATCGTGCGGGTGATGAAGAAACTGGATGAGCAGGCACCCCATGAGGTGATGCTGACCATCGAC
GCCAGCACCGGGCAGAACGCCGTCAGTCAGGCGCGCCTGTTCAACGAGGCCGTTGGGCTGACCGGTATTACCCTGACCAA
GCTGGACGGCACCGCCAAGGGCGGAGTGATCTTCTCCGTTGCCGATCGGTTTGGCATCCCGATTCGCTATATCGGCGTCG
GGGAAGGCATTGAGGATTTGCGCCCCTTTAAGGCTGATGATTTTATTGAGGCACTTTTTGCCCGAGAGGATTAA

Upstream 100 bases:

>100_bases
TAAACCGAATTGGTGTCTCTCGCCGCGCGGCCTTGCCCGCGCCAGCTAACGGCGGGAGTTCGCTTATAGCCTTGATTTGA
GGCGGGAGTAGAGTCGTAAG

Downstream 100 bases:

>100_bases
AACGGATGATTCGCTTCGAACAGGTCAGTAAAGCGTATCTGGGCGGGCGTCAGGCCCTGCAGGGGGTGGATTTTCACCTG
CAGCAGGGCGAAATGGCGTT

Product: cell division protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MAKDKKRGFFSWLGFGRQQEDQPQEHAPEQVLDREPEQAVPAADPASVSKPCAEIAPAEKPALDIMPAVTMLTAEQAEQA
EQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQ
AEQAEQAEQAEQAEQMAQEIIVARAAAMATAALDVSPVSTEDSVVETSAVAPIVDLAEVARSQETADLQDIDAEEEASPA
PISVREQEKPVKEGFFARLKRSLVKTRQNLGSGFFSLFRGKKIDDDLFDELEEQLIVADVGVETTRKIIDSLTAHASRKE
LKDAEALYGKLKEEMGEILQKVDAPLDISGHQPFVILMVGVNGVGKTTTIGKLARQFQAQGKSVMLAAGDTFRAAAVEQL
QVWGERNHISVIAQHTGADSASVIFDAIQAAKARKVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEQAPHEVMLTID
ASTGQNAVSQARLFNEAVGLTGITLTKLDGTAKGGVIFSVADRFGIPIRYIGVGEGIEDLRPFKADDFIEALFARED

Sequences:

>Translated_557_residues
MAKDKKRGFFSWLGFGRQQEDQPQEHAPEQVLDREPEQAVPAADPASVSKPCAEIAPAEKPALDIMPAVTMLTAEQAEQA
EQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQ
AEQAEQAEQAEQAEQMAQEIIVARAAAMATAALDVSPVSTEDSVVETSAVAPIVDLAEVARSQETADLQDIDAEEEASPA
PISVREQEKPVKEGFFARLKRSLVKTRQNLGSGFFSLFRGKKIDDDLFDELEEQLIVADVGVETTRKIIDSLTAHASRKE
LKDAEALYGKLKEEMGEILQKVDAPLDISGHQPFVILMVGVNGVGKTTTIGKLARQFQAQGKSVMLAAGDTFRAAAVEQL
QVWGERNHISVIAQHTGADSASVIFDAIQAAKARKVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEQAPHEVMLTID
ASTGQNAVSQARLFNEAVGLTGITLTKLDGTAKGGVIFSVADRFGIPIRYIGVGEGIEDLRPFKADDFIEALFARED
>Mature_556_residues
AKDKKRGFFSWLGFGRQQEDQPQEHAPEQVLDREPEQAVPAADPASVSKPCAEIAPAEKPALDIMPAVTMLTAEQAEQAE
QAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQA
EQAEQAEQAEQAEQMAQEIIVARAAAMATAALDVSPVSTEDSVVETSAVAPIVDLAEVARSQETADLQDIDAEEEASPAP
ISVREQEKPVKEGFFARLKRSLVKTRQNLGSGFFSLFRGKKIDDDLFDELEEQLIVADVGVETTRKIIDSLTAHASRKEL
KDAEALYGKLKEEMGEILQKVDAPLDISGHQPFVILMVGVNGVGKTTTIGKLARQFQAQGKSVMLAAGDTFRAAAVEQLQ
VWGERNHISVIAQHTGADSASVIFDAIQAAKARKVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEQAPHEVMLTIDA
STGQNAVSQARLFNEAVGLTGITLTKLDGTAKGGVIFSVADRFGIPIRYIGVGEGIEDLRPFKADDFIEALFARED

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=203, Percent_Identity=34.9753694581281, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI4507215, Length=203, Percent_Identity=34.9753694581281, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI295424842, Length=331, Percent_Identity=29.9093655589124, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI23308697, Length=330, Percent_Identity=30, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI89061728, Length=147, Percent_Identity=31.2925170068027, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1788963, Length=300, Percent_Identity=33, Blast_Score=157, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI193206261, Length=318, Percent_Identity=31.4465408805031, Blast_Score=128, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=282, Percent_Identity=28.7234042553192, Blast_Score=116, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=203, Percent_Identity=37.4384236453202, Blast_Score=130, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6320498, Length=218, Percent_Identity=32.1100917431193, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24641198, Length=333, Percent_Identity=28.8288288288288, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI17647949, Length=285, Percent_Identity=28.7719298245614, Blast_Score=119, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 60471; Mature: 60340

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDKKRGFFSWLGFGRQQEDQPQEHAPEQVLDREPEQAVPAADPASVSKPCAEIAPAEK
CCCCCCCCHHHHHCCCCCCCCCCHHCCCHHHHCCCCHHCCCCCCCCHHCCCHHHCCCCCC
PALDIMPAVTMLTAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQAEQMAQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVARAAAMATAALDVSPVSTEDSVVETSAVAPIVDLAEVARSQETADLQDIDAEEEASPA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
PISVREQEKPVKEGFFARLKRSLVKTRQNLGSGFFSLFRGKKIDDDLFDELEEQLIVADV
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
GVETTRKIIDSLTAHASRKELKDAEALYGKLKEEMGEILQKVDAPLDISGHQPFVILMVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
VNGVGKTTTIGKLARQFQAQGKSVMLAAGDTFRAAAVEQLQVWGERNHISVIAQHTGADS
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCH
ASVIFDAIQAAKARKVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEQAPHEVMLTID
HHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
ASTGQNAVSQARLFNEAVGLTGITLTKLDGTAKGGVIFSVADRFGIPIRYIGVGEGIEDL
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHCCCEEEEECCCCHHHC
RPFKADDFIEALFARED
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AKDKKRGFFSWLGFGRQQEDQPQEHAPEQVLDREPEQAVPAADPASVSKPCAEIAPAEK
CCCCCCCHHHHHCCCCCCCCCCHHCCCHHHHCCCCHHCCCCCCCCHHCCCHHHCCCCCC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CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]