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The map label for this gene is yrfD [C]

Identifier: 238921477

GI number: 238921477

Start: 3514198

End: 3515028

Strand: Reverse

Name: yrfD [C]

Synonym: NT01EI_3629

Alternate gene names: 238921477

Gene position: 3515028-3514198 (Counterclockwise)

Preceding gene: 238921479

Following gene: 238921476

Centisome position: 92.2

GC content: 70.16

Gene sequence:

>831_bases
ATGGGGGGCGGTCATTGGCGCTTGGGGATCGATATTCAGCCCGCTCAGCTGGTCGCCGTGGCGCTCTCGGCGCGCCGCGA
TGGCATCCAGCTGCGCGGTTGGTGGCGACTGCCGCTGACGGCTGACCCGGATCGGGATGGCCTCTCTCCCTCGCTGCCCG
CGACGCTGACTACGCTGCGCGCCCGTTTGCCGCGTCGGCTGTCAGTGCGGGCGGCTTTTCCCGCCGAGCGGGCGATCCGC
GATATGCTGCCGGGCAGCACGCTTCCCCTGACCCCCTGGCAGCGGCATCGCCTGCTGTTGGCGCAGGGAGAGCGTCAGCT
GATGTTGCCCGCACACCAGTTGGCCTGTGATTTCGCCCCCGCGCCCGAGGGGGGCGGGCGCTGGCAGGTGTGTGCCGTGC
ACCGCGCGCAGCGCGATCGGTGGTGCGCGCTGTTCGACAGCGCAGGCTTACCGCTGCAGCGCTTAACGCTGGCACCCTGT
GCATTGCGGCGTTTGGCTCGTCTGGCCGGGGAGAGCCCAGCAGCGCCGTTGATCTACGGCGATGGGTATCGCTTTTGCTG
GATAGCGCCCTGGGGATCACCACTACAGTATGGCTTTGTTTCCCTCAGCGACGGCCCAGAGGCGGCCTGTGCCCAGGCCG
TGGCCGCGCTGCCGCCCGGTGTGGCCGACGGCGTCGCGCCGCTGCACTGCGGTAGCGATAGTGGCCACCGGGGGTGGTCC
GGCCTGCGCGCCGTACGTCATCTCGTCTCCCCGCTGCCCGCCGATCCCGCGGCGTTTTGCCTCGCGCTGGGGCTGGCCGT
GATGCCGGAGTCACCGCTGTGGATGACATAG

Upstream 100 bases:

>100_bases
ATGTCAGTTGGGCAGTTTATAAACAAACGGGCAGTAGTATAAAGGCTAGCAGACACAGAGGATACGTTCTTTTAGTAAGT
TGATGATAAGGAGGCGCGGC

Downstream 100 bases:

>100_bases
ATCTGCTTTCTTGGCGTGAGGCCCGGCGCCGGGCGCGTCTTCGTATGCTATGGCTGACGCTGGTGCTGGGAATACCTGCG
TTCACTGCGCTGGGGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MGGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGLSPSLPATLTTLRARLPRRLSVRAAFPAERAIR
DMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACDFAPAPEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPC
ALRRLARLAGESPAAPLIYGDGYRFCWIAPWGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSGHRGWS
GLRAVRHLVSPLPADPAAFCLALGLAVMPESPLWMT

Sequences:

>Translated_276_residues
MGGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGLSPSLPATLTTLRARLPRRLSVRAAFPAERAIR
DMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACDFAPAPEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPC
ALRRLARLAGESPAAPLIYGDGYRFCWIAPWGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSGHRGWS
GLRAVRHLVSPLPADPAAFCLALGLAVMPESPLWMT
>Mature_275_residues
GGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGLSPSLPATLTTLRARLPRRLSVRAAFPAERAIRD
MLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACDFAPAPEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPCA
LRRLARLAGESPAAPLIYGDGYRFCWIAPWGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSGHRGWSG
LRAVRHLVSPLPADPAAFCLALGLAVMPESPLWMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29731; Mature: 29600

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGLSPSLPATLTTLR
CCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
ARLPRRLSVRAAFPAERAIRDMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACDFAP
HHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCEEECCHHHHHCCCCC
APEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPCALRRLARLAGESPAAPLIYG
CCCCCCEEEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
DGYRFCWIAPWGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSGHRGWS
CCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHH
GLRAVRHLVSPLPADPAAFCLALGLAVMPESPLWMT
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGLSPSLPATLTTLR
CCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
ARLPRRLSVRAAFPAERAIRDMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACDFAP
HHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCEEECCHHHHHCCCCC
APEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPCALRRLARLAGESPAAPLIYG
CCCCCCEEEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
DGYRFCWIAPWGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSGHRGWS
CCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHH
GLRAVRHLVSPLPADPAAFCLALGLAVMPESPLWMT
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA