Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
---|---|
Accession | NC_012779 |
Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is hyuA [H]
Identifier: 238921386
GI number: 238921386
Start: 3428244
End: 3429632
Strand: Reverse
Name: hyuA [H]
Synonym: NT01EI_3530
Alternate gene names: 238921386
Gene position: 3429632-3428244 (Counterclockwise)
Preceding gene: 238921387
Following gene: 238921385
Centisome position: 89.96
GC content: 61.34
Gene sequence:
>1389_bases ATGATGAAAAGCCTGATCAAAAACGGCACGGTGGTGAATCACAACGGCGAACGGCGCGCGGATGTGTTGATCGAACACGG TATGATCAGCTGTCTGGAACCCGGCCTGTCGGAGGACGAGGTGGACGAAGTGATCGATGCCGAAGGGTGCTACGTGATGC CCGGCGGAGTGGATGTACACACCCACTTTAATATCGACGTCGGCCTGGCCCGCAGCTGTGATGATTTTTTTACCGGCACC CGCGCGGCGGCGTGTGGCGGTACAACAACCATTATCGACCATATGGGCTTTGGCCCTAAGGGCTGCTCTCTGCATCACCA GCTGGCGGCCTACCACGGCTACGCTGCGGATAAGGCAGTGATCGACTACGGCTTTCACGGTGTGATCCAACATATCGACG AGGCGATCCTCGACGAAATGGCCTCGATGGTGCATGACGAAGGAATCAGCAGCTTTAAGCTCTATCTGACCTACGGTTTC AAGCTTGACGACGATGCGGTGCTGCGCGCGTTGCGCCGTCTGCATCAGGTCGGCGCGCTGACCACGGTGCACCCGGAGAA CGATGCCGCCATCGCCCAGCGGCGCGCCCATTATCTGGCCAACGGTCAGGTGGCACCGATCTTCCATGCCCGCAGCCGTC CACTGGAGTGCGAGGCGGAGGCCATTGCGCGCATGATCAATCTGGCGCAGCTGGCCGGGAACGCGCCGCTGTATATCGTT CACCTTTCCAATGGGCTGGGACTGGACTACCTGCGTCTGGCCCGTGCGCGCCATCAGCCGGTGTGGGTCGAAACCTGTCC ACAGTATTTGCTGCTGGATGAGCGCAGCTATCTGCGTGAAGACGGCCTGAAGTTTATTCTCAGTCCACCGCTGCGCAACC TGCGCGAACAGGACGCCCTGTGGTGCGGCATCAGCGATGGTGCTATCGACGTAGTGGCCACCGACCACTGTACCTTCCCC TACAGCCAGCGGCTGGCGCTCTCCGGCGGTAACTTCAGCCGCTGTCCCAATGGCCTGCCGGGGGTTGAAAACCGGATGCT GCTGCTGTTCTCCGCCGGGGTGATGACCGGGCGTATCTCGCTGGCGCATTTCGTGTCGTTGACCAGCGCGACCCCGGCAC GCCTGTTCGGTCTGTGGCCGCAGAAGGGAGTCATCGCGCCGGGCGCCGACGCCGATGTGGTGATCATCGATCCACGCCGG ACGACGACGCTGCGCCATAGCGACTTACATGACAATGCCGACTACAGCCCCTATGAGGGCATGGTATGCCGGGGGGCCAT TCGTCATACCCTGGCGCGCGGCGAGCGTATTTTCAGTGAGGGTGAGTTTAGCGCTGAGCCGGGGCGCGGGCGTTTCCTGA AACGGAAGGCGTTTCAGGCACCGGTATAA
Upstream 100 bases:
>100_bases ATGCCGCTATCCCGCTGACCTATCTTGAGCAACTGAAGAAGTAATCCATACGTTATCAACCCCGGCATCGTGCATGCCGG GGTCTCTTTGCGGAGCCTCG
Downstream 100 bases:
>100_bases GCAGTACGGCTGCGCCCGCATACCGCCGGGAAGCTTGCGCGACGGGATGCAGTCCGGTCCAACAACATACGAGTGAGGAT ATGATGAAGAAAAAAATCGT
Product: phenylhydantoinase
Products: NA
Alternate protein names: Hydantoin-utilizing enzyme hyuA [H]
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MMKSLIKNGTVVNHNGERRADVLIEHGMISCLEPGLSEDEVDEVIDAEGCYVMPGGVDVHTHFNIDVGLARSCDDFFTGT RAAACGGTTTIIDHMGFGPKGCSLHHQLAAYHGYAADKAVIDYGFHGVIQHIDEAILDEMASMVHDEGISSFKLYLTYGF KLDDDAVLRALRRLHQVGALTTVHPENDAAIAQRRAHYLANGQVAPIFHARSRPLECEAEAIARMINLAQLAGNAPLYIV HLSNGLGLDYLRLARARHQPVWVETCPQYLLLDERSYLREDGLKFILSPPLRNLREQDALWCGISDGAIDVVATDHCTFP YSQRLALSGGNFSRCPNGLPGVENRMLLLFSAGVMTGRISLAHFVSLTSATPARLFGLWPQKGVIAPGADADVVIIDPRR TTTLRHSDLHDNADYSPYEGMVCRGAIRHTLARGERIFSEGEFSAEPGRGRFLKRKAFQAPV
Sequences:
>Translated_462_residues MMKSLIKNGTVVNHNGERRADVLIEHGMISCLEPGLSEDEVDEVIDAEGCYVMPGGVDVHTHFNIDVGLARSCDDFFTGT RAAACGGTTTIIDHMGFGPKGCSLHHQLAAYHGYAADKAVIDYGFHGVIQHIDEAILDEMASMVHDEGISSFKLYLTYGF KLDDDAVLRALRRLHQVGALTTVHPENDAAIAQRRAHYLANGQVAPIFHARSRPLECEAEAIARMINLAQLAGNAPLYIV HLSNGLGLDYLRLARARHQPVWVETCPQYLLLDERSYLREDGLKFILSPPLRNLREQDALWCGISDGAIDVVATDHCTFP YSQRLALSGGNFSRCPNGLPGVENRMLLLFSAGVMTGRISLAHFVSLTSATPARLFGLWPQKGVIAPGADADVVIIDPRR TTTLRHSDLHDNADYSPYEGMVCRGAIRHTLARGERIFSEGEFSAEPGRGRFLKRKAFQAPV >Mature_462_residues MMKSLIKNGTVVNHNGERRADVLIEHGMISCLEPGLSEDEVDEVIDAEGCYVMPGGVDVHTHFNIDVGLARSCDDFFTGT RAAACGGTTTIIDHMGFGPKGCSLHHQLAAYHGYAADKAVIDYGFHGVIQHIDEAILDEMASMVHDEGISSFKLYLTYGF KLDDDAVLRALRRLHQVGALTTVHPENDAAIAQRRAHYLANGQVAPIFHARSRPLECEAEAIARMINLAQLAGNAPLYIV HLSNGLGLDYLRLARARHQPVWVETCPQYLLLDERSYLREDGLKFILSPPLRNLREQDALWCGISDGAIDVVATDHCTFP YSQRLALSGGNFSRCPNGLPGVENRMLLLFSAGVMTGRISLAHFVSLTSATPARLFGLWPQKGVIAPGADADVVIIDPRR TTTLRHSDLHDNADYSPYEGMVCRGAIRHTLARGERIFSEGEFSAEPGRGRFLKRKAFQAPV
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives with an aromatic side chains at the 5'-position. Has no activity on dihydropyrimidines. The physiological function is unknown [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=465, Percent_Identity=36.1290322580645, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI4503051, Length=460, Percent_Identity=35.4347826086957, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI62422571, Length=460, Percent_Identity=35.4347826086957, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI4503377, Length=461, Percent_Identity=35.5748373101952, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI4503379, Length=460, Percent_Identity=33.4782608695652, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI190194363, Length=463, Percent_Identity=34.341252699784, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI19923821, Length=463, Percent_Identity=34.1252699784017, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI18105007, Length=404, Percent_Identity=25, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI87082175, Length=461, Percent_Identity=75.0542299349241, Blast_Score=720, Evalue=0.0, Organism=Escherichia coli, GI1786722, Length=469, Percent_Identity=32.409381663113, Blast_Score=187, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71989490, Length=457, Percent_Identity=37.199124726477, Blast_Score=278, Evalue=4e-75, Organism=Caenorhabditis elegans, GI17539558, Length=459, Percent_Identity=36.6013071895425, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI86575075, Length=460, Percent_Identity=30.8695652173913, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI193204318, Length=404, Percent_Identity=25.2475247524752, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6322218, Length=434, Percent_Identity=26.2672811059908, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI221377917, Length=467, Percent_Identity=35.117773019272, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI17137462, Length=454, Percent_Identity=34.5814977973568, Blast_Score=251, Evalue=6e-67, Organism=Drosophila melanogaster, GI24644287, Length=305, Percent_Identity=35.4098360655738, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI24644289, Length=230, Percent_Identity=36.9565217391304, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI18859883, Length=448, Percent_Identity=27.0089285714286, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI24642586, Length=413, Percent_Identity=25.90799031477, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.-.-.- [C]
Molecular weight: Translated: 50707; Mature: 50707
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSLIKNGTVVNHNGERRADVLIEHGMISCLEPGLSEDEVDEVIDAEGCYVMPGGVDVH CCHHHHCCCCEEECCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCEECCCCEEEE THFNIDVGLARSCDDFFTGTRAAACGGTTTIIDHMGFGPKGCSLHHQLAAYHGYAADKAV EEEEEEECCCCCCHHHHCCCCHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHH IDYGFHGVIQHIDEAILDEMASMVHDEGISSFKLYLTYGFKLDDDAVLRALRRLHQVGAL HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEECHHHHHHHHHHHHHHCCE TTVHPENDAAIAQRRAHYLANGQVAPIFHARSRPLECEAEAIARMINLAQLAGNAPLYIV EEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE HLSNGLGLDYLRLARARHQPVWVETCPQYLLLDERSYLREDGLKFILSPPLRNLREQDAL ECCCCCCHHHHHHHHHCCCCEEHHHCCHHEEECCHHHHHHCCCEEEECCCHHHHHHCCCE WCGISDGAIDVVATDHCTFPYSQRLALSGGNFSRCPNGLPGVENRMLLLFSAGVMTGRIS EEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCHHH LAHFVSLTSATPARLFGLWPQKGVIAPGADADVVIIDPRRTTTLRHSDLHDNADYSPYEG HHHHHHHCCCCCHHHEECCCCCCEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCC MVCRGAIRHTLARGERIFSEGEFSAEPGRGRFLKRKAFQAPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MMKSLIKNGTVVNHNGERRADVLIEHGMISCLEPGLSEDEVDEVIDAEGCYVMPGGVDVH CCHHHHCCCCEEECCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCEECCCCEEEE THFNIDVGLARSCDDFFTGTRAAACGGTTTIIDHMGFGPKGCSLHHQLAAYHGYAADKAV EEEEEEECCCCCCHHHHCCCCHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHH IDYGFHGVIQHIDEAILDEMASMVHDEGISSFKLYLTYGFKLDDDAVLRALRRLHQVGAL HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEECHHHHHHHHHHHHHHCCE TTVHPENDAAIAQRRAHYLANGQVAPIFHARSRPLECEAEAIARMINLAQLAGNAPLYIV EEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE HLSNGLGLDYLRLARARHQPVWVETCPQYLLLDERSYLREDGLKFILSPPLRNLREQDAL ECCCCCCHHHHHHHHHCCCCEEHHHCCHHEEECCHHHHHHCCCEEEECCCHHHHHHCCCE WCGISDGAIDVVATDHCTFPYSQRLALSGGNFSRCPNGLPGVENRMLLLFSAGVMTGRIS EEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCHHH LAHFVSLTSATPARLFGLWPQKGVIAPGADADVVIIDPRRTTTLRHSDLHDNADYSPYEG HHHHHHHCCCCCHHHEECCCCCCEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCC MVCRGAIRHTLARGERIFSEGEFSAEPGRGRFLKRKAFQAPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA