The gene/protein map for NC_012779 is currently unavailable.
Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is ywbG [H]

Identifier: 238921368

GI number: 238921368

Start: 3405384

End: 3406073

Strand: Reverse

Name: ywbG [H]

Synonym: NT01EI_3512

Alternate gene names: 238921368

Gene position: 3406073-3405384 (Counterclockwise)

Preceding gene: 238921369

Following gene: 238921365

Centisome position: 89.34

GC content: 64.06

Gene sequence:

>690_bases
ATGAGCGATCTGGGGATCGGCATGCTGTGTCTGGCAGTGACGCTGGCGCTCTACTTCGCCAATAAGCAGCTGTACCGTCG
GGTTCACCGTATCTGGCTGATGCCGCTGGTGCTGACGCCGCTGTTGTTGGTCGCGCTGCTGCTGATCGGGCATATCTCCT
ACCGCGAGTACATGGGAGAGAGCCACTGGCTGCTGTGGCTGCTGGGACCGGCGACCATCGCCTTTGCCGTACCGGTGTAT
GAGAACCTGGCGATTATCCGCCGTCACTGGCTGTCGTTGACGGTCGGTGTACTGACCTCGACGCTGGTGGCGGTGCTCAG
CTCGGTGTGGCTGGCGCGGCTGCTGACCCTGCCGGAAAGTATTCAGCGTAGCCTGGCAGTACGGTCGATTACCACGCCAT
TCGCCATTGAGGCGGCCAAGCGCCTGGGGGGACAGCCGGATCTGGTGGCGCTGTTCGTGGTGCTGACCGGGGTGTTTGGT
ATGGCGGTGGGAGACATGCTGCTGCTGCGTCTCTCTGTGCGCAGCGGCATGGCCAAGGGCGCCGGGCTCGGCGCATCGTC
CCACGGCGCCGGAACGGCCAAGGCCTATGAGATGGGGCAGACCGAAGGCGTTGTCTCCAGCCTGGTGATGATGCTGGCCG
GCGTGGTGACAGTGCTGCTTTCGCCGCTAATCGGCCGCCTGCTGTGGTAG

Upstream 100 bases:

>100_bases
TGAGCACCCTGTTAACGCTGGGGATGACGGCGCTGGTGGTGGATAGAGTCTACCGGCTGGAGCTGTGGCTACAGCGGCGC
CGCGCCGGGGTGGTGCGCTG

Downstream 100 bases:

>100_bases
GGATCGCTCAGGGAAACATCTGCGCCAGATAGTGATTCAAACGTTCGCGCGAGGTAAAGCCGTGGGGAACACCGATAAAA
GCCGGTGACGCGGCGTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSDLGIGMLCLAVTLALYFANKQLYRRVHRIWLMPLVLTPLLLVALLLIGHISYREYMGESHWLLWLLGPATIAFAVPVY
ENLAIIRRHWLSLTVGVLTSTLVAVLSSVWLARLLTLPESIQRSLAVRSITTPFAIEAAKRLGGQPDLVALFVVLTGVFG
MAVGDMLLLRLSVRSGMAKGAGLGASSHGAGTAKAYEMGQTEGVVSSLVMMLAGVVTVLLSPLIGRLLW

Sequences:

>Translated_229_residues
MSDLGIGMLCLAVTLALYFANKQLYRRVHRIWLMPLVLTPLLLVALLLIGHISYREYMGESHWLLWLLGPATIAFAVPVY
ENLAIIRRHWLSLTVGVLTSTLVAVLSSVWLARLLTLPESIQRSLAVRSITTPFAIEAAKRLGGQPDLVALFVVLTGVFG
MAVGDMLLLRLSVRSGMAKGAGLGASSHGAGTAKAYEMGQTEGVVSSLVMMLAGVVTVLLSPLIGRLLW
>Mature_228_residues
SDLGIGMLCLAVTLALYFANKQLYRRVHRIWLMPLVLTPLLLVALLLIGHISYREYMGESHWLLWLLGPATIAFAVPVYE
NLAIIRRHWLSLTVGVLTSTLVAVLSSVWLARLLTLPESIQRSLAVRSITTPFAIEAAKRLGGQPDLVALFVVLTGVFGM
AVGDMLLLRLSVRSGMAKGAGLGASSHGAGTAKAYEMGQTEGVVSSLVMMLAGVVTVLLSPLIGRLLW

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=214, Percent_Identity=33.6448598130841, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24718; Mature: 24587

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLGIGMLCLAVTLALYFANKQLYRRVHRIWLMPLVLTPLLLVALLLIGHISYREYMGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SHWLLWLLGPATIAFAVPVYENLAIIRRHWLSLTVGVLTSTLVAVLSSVWLARLLTLPES
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IQRSLAVRSITTPFAIEAAKRLGGQPDLVALFVVLTGVFGMAVGDMLLLRLSVRSGMAKG
HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGLGASSHGAGTAKAYEMGQTEGVVSSLVMMLAGVVTVLLSPLIGRLLW
CCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLGIGMLCLAVTLALYFANKQLYRRVHRIWLMPLVLTPLLLVALLLIGHISYREYMGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SHWLLWLLGPATIAFAVPVYENLAIIRRHWLSLTVGVLTSTLVAVLSSVWLARLLTLPES
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IQRSLAVRSITTPFAIEAAKRLGGQPDLVALFVVLTGVFGMAVGDMLLLRLSVRSGMAKG
HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGLGASSHGAGTAKAYEMGQTEGVVSSLVMMLAGVVTVLLSPLIGRLLW
CCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]