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The map label for this gene is cidA [H]

Identifier: 238921369

GI number: 238921369

Start: 3406128

End: 3406544

Strand: Reverse

Name: cidA [H]

Synonym: NT01EI_3513

Alternate gene names: 238921369

Gene position: 3406544-3406128 (Counterclockwise)

Preceding gene: 238921372

Following gene: 238921368

Centisome position: 89.36

GC content: 63.07

Gene sequence:

>417_bases
ATGTCTCTGGCGTTGCGCCCTATTATGGCGCACCTGCGCACCTGCGCACCTGCGCACCTGCGCACCTGCGCACCTGCGCA
CCTGCGCACCCATACCCAGGTGCCGTTGCAGGTGGTGCTTTATGCGCTGTTGTTTCTCTTTTCCCAATGGCTGGTCAGCC
GTTTTGCCCTGCCGCTGCCGGCCAATATCGTCGGCATGCTGCTGCTGTTGGTGCTGATCGCGCTGCGTATTTTGCCGCTG
GCATGGGTGAAGGCGGGCTCCCGCTGGCTACTGGCCGAGATGCTGCTGTTTTTCGTCCCAGCGGTGGTGGCGGTGGTGAA
CTACGCCTCGCTGCTGATGGTGAGGGGGGCGAATCGTGGCGGTGATCGCTCTGAGCACCCTGTTAACGCTGGGGATGACG
GCGCTGGTGGTGGATAG

Upstream 100 bases:

>100_bases
CATTTATCAATGATGGCGATAATTTTAATTCATTTTATACCCGGGATCTTCTTTGCCTATACTGTGCGACTTATCACATT
AATCCCCTTCTGAGGTTTGT

Downstream 100 bases:

>100_bases
AGTCTACCGGCTGGAGCTGTGGCTACAGCGGCGCCGCGCCGGGGTGGTGCGCTGATGAGCGATCTGGGGATCGGCATGCT
GTGTCTGGCAGTGACGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLALRPIMAHLRTCAPAHLRTCAPAHLRTHTQVPLQVVLYALLFLFSQWLVSRFALPLPANIVGMLLLLVLIALRILPL
AWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVRGANRGGDRSEHPVNAGDDGAGGG

Sequences:

>Translated_138_residues
MSLALRPIMAHLRTCAPAHLRTCAPAHLRTHTQVPLQVVLYALLFLFSQWLVSRFALPLPANIVGMLLLLVLIALRILPL
AWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVRGANRGGDRSEHPVNAGDDGAGGG
>Mature_137_residues
SLALRPIMAHLRTCAPAHLRTCAPAHLRTHTQVPLQVVLYALLFLFSQWLVSRFALPLPANIVGMLLLLVLIALRILPLA
WVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVRGANRGGDRSEHPVNAGDDGAGGG

Specific function: Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. W

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CidA/LrgA family. CidA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 14939; Mature: 14808

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLALRPIMAHLRTCAPAHLRTCAPAHLRTHTQVPLQVVLYALLFLFSQWLVSRFALPLP
CCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ANIVGMLLLLVLIALRILPLAWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVRGANRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDRSEHPVNAGDDGAGGG
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLALRPIMAHLRTCAPAHLRTCAPAHLRTHTQVPLQVVLYALLFLFSQWLVSRFALPLP
CCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ANIVGMLLLLVLIALRILPLAWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVRGANRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDRSEHPVNAGDDGAGGG
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA