Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921298
Identifier: 238921298
GI number: 238921298
Start: 3331783
End: 3332850
Strand: Reverse
Name: 238921298
Synonym: NT01EI_3441
Alternate gene names: NA
Gene position: 3332850-3331783 (Counterclockwise)
Preceding gene: 238921299
Following gene: 238921297
Centisome position: 87.42
GC content: 55.62
Gene sequence:
>1068_bases ATGATCACATATACACAAGGCAATTTACTGGACGCGCCCGTGGAAGCACTGGTGAATACGGTGAATACCGTCGGTGTCAT GGGTAAAGGCATCGCGCTGATGTTTAAAGAGCGCTTCCCCGACAATATGAAAGCCTATGCCGACGCCTGCAAACAAAAGC AGGTGATGACCGGCAAGATGTTTATTACCGAAACCGGCGAGCTGATGGGGCCACGCTGGATCGTCAACTTCCCTACCAAG CAGCACTGGCGCGCCGACTCCCGCATGGCGTGGATCGAAGACGGTTTGCAGGACTTGCGCCGCTTTTTGATCGAAGAAAA CGTGCAGTCCATCGCCATTCCCCCGCTGGGCGCGGGCAACGGCGGCCTGAACTGGCCGGATGTCCGGGCGCGGATTGAAT CTGCGCTGGGCGACCTTCAGGACACGGAAATCCTGATTTATGAGCCTACCGAAAAATACCAGAACGTCGCCAAGAGCAGC GGCGTAAAAAAGCTCACCCCCGCCAGAGCGATGATCGCTGAACTGGTGCGCCGCTACTGGGTGCTGGGTATGGAGTGCAG CCTGCTGGAAATCCAGAAGCTGGCATGGCTGCTACAACGCGCCATTGAACAGCACCAGCAGGAGGACGTGCTAAAACTGC GGTTTGAGGCGCACTATTACGGCCCCTATGCTCCTAACCTGAACCATCTGCTTAACGCGCTGGACGGTACCTATCTGAAA GCCGAAAAGCGTATCCCGGACAGCCAGCCACTGGATGTGATCTGGTTTAACGATCGGGAAAAAGAACACATCAACCTCTG GCTGAACAGCGAAGCCAAAGCGTGGTTGCCAGCGCTTGAGCAGGTCAGCCAGTTGATTGACGGTTTTGAATCGCCGTTTG GTCTGGAGCTGTTGGCGACCGTTGACTGGTTGTTGACCCGGGGACAATGCCAGCCGACGCTGGACTCGGTGAAAGAGGGG TTGCATCAGTGGCCTGCGGGAGAACCTTGGGCCAGCCGTAAGATAAAGCTGTTTGACGATAAGAATCTGCAATTCGCCAT TAACCGCGTGATGGAGTTTCATTGCTGA
Upstream 100 bases:
>100_bases TGATTTGTTACAACGATGGCGTCAGGTTACAATTAGAGCAGTGGCTGTCGCAACGTAATCTGACAATGCCCGTTCACGCA CGGGCCGGGTGGTACTTCTC
Downstream 100 bases:
>100_bases AAATTAGCCTGTCCCAGCAGGCGTCATTGTTGCAGTCAGACTGGATGCGGACAGCGCGGAAAAACCGGAGCGTACACGCA GTACGTGAGGATTTTGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Appr-1-P Processing Domain Protein; Appr-1-P Processing Family Protein; Appr-1-P Processing Protein; Appr-1-P Processing; Appr-1-P Processing Family
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYADACKQKQVMTGKMFITETGELMGPRWIVNFPTK QHWRADSRMAWIEDGLQDLRRFLIEENVQSIAIPPLGAGNGGLNWPDVRARIESALGDLQDTEILIYEPTEKYQNVAKSS GVKKLTPARAMIAELVRRYWVLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLLNALDGTYLK AEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKAWLPALEQVSQLIDGFESPFGLELLATVDWLLTRGQCQPTLDSVKEG LHQWPAGEPWASRKIKLFDDKNLQFAINRVMEFHC
Sequences:
>Translated_355_residues MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYADACKQKQVMTGKMFITETGELMGPRWIVNFPTK QHWRADSRMAWIEDGLQDLRRFLIEENVQSIAIPPLGAGNGGLNWPDVRARIESALGDLQDTEILIYEPTEKYQNVAKSS GVKKLTPARAMIAELVRRYWVLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLLNALDGTYLK AEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKAWLPALEQVSQLIDGFESPFGLELLATVDWLLTRGQCQPTLDSVKEG LHQWPAGEPWASRKIKLFDDKNLQFAINRVMEFHC >Mature_355_residues MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYADACKQKQVMTGKMFITETGELMGPRWIVNFPTK QHWRADSRMAWIEDGLQDLRRFLIEENVQSIAIPPLGAGNGGLNWPDVRARIESALGDLQDTEILIYEPTEKYQNVAKSS GVKKLTPARAMIAELVRRYWVLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLLNALDGTYLK AEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKAWLPALEQVSQLIDGFESPFGLELLATVDWLLTRGQCQPTLDSVKEG LHQWPAGEPWASRKIKLFDDKNLQFAINRVMEFHC
Specific function: Unknown
COG id: COG2110
COG function: function code R; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40620; Mature: 40620
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYADACKQKQVMTGKM CEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEE FITETGELMGPRWIVNFPTKQHWRADSRMAWIEDGLQDLRRFLIEENVQSIAIPPLGAGN EEEECCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCC GGLNWPDVRARIESALGDLQDTEILIYEPTEKYQNVAKSSGVKKLTPARAMIAELVRRYW CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLLNALDGTYLK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCEEE AEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKAWLPALEQVSQLIDGFESPFGLELLAT HHHCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH VDWLLTRGQCQPTLDSVKEGLHQWPAGEPWASRKIKLFDDKNLQFAINRVMEFHC HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYADACKQKQVMTGKM CEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEE FITETGELMGPRWIVNFPTKQHWRADSRMAWIEDGLQDLRRFLIEENVQSIAIPPLGAGN EEEECCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCC GGLNWPDVRARIESALGDLQDTEILIYEPTEKYQNVAKSSGVKKLTPARAMIAELVRRYW CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLLNALDGTYLK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCEEE AEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKAWLPALEQVSQLIDGFESPFGLELLAT HHHCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH VDWLLTRGQCQPTLDSVKEGLHQWPAGEPWASRKIKLFDDKNLQFAINRVMEFHC HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA