Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921299

Identifier: 238921299

GI number: 238921299

Start: 3332847

End: 3333503

Strand: Reverse

Name: 238921299

Synonym: NT01EI_3442

Alternate gene names: NA

Gene position: 3333503-3332847 (Counterclockwise)

Preceding gene: 238921300

Following gene: 238921298

Centisome position: 87.44

GC content: 56.16

Gene sequence:

>657_bases
ATGGCTTATGATTACAGCGCCAACCTCAACCCGGAAAAAGCCCTGATCTGGCGCATTGTCCATCGGGATAATATCCCGTG
GATACTGGACCACGGTCTGCACTGCGGCAACAGCCCGGTGCAGGCGGCAAACTGGATCAATATCGGCAACCCGGAACTTA
TCGGCAAACGCGCCGGGCATCCGGTGCCTGTCGGTATGGGCGGGACGCTGCATGACTACGTGCCGTTTTACTTTACCCCC
TTTTCGCCGATGCTGATGAATATCCACAGCGGGCGTGGCGGCATTACGCAGCGCCCCAATGAGGAAATCGTCATTCTGGT
CAGCAACCTGCGAAACGTGGCGGCGCAGAACATCCCCTTCGTGTTTACCGACAGCCACGCCTACTATAACTGGGTCAACT
ACTACACCCGTCTGGACGATCTGAACCAGATCGACTGGTCTATCTTACAGGCGCGGGATTTCCGTCGCGATCCGGACGAT
CCGGCGAAGTTTGAACGCTATCAGGCCGAGGCGTTAATCTGGAAGCACTGCCCCATCACACTGCTGGTCGGGATGATTTG
TTACAACGATGGCGTCAGGTTACAATTAGAGCAGTGGCTGTCGCAACGTAATCTGACAATGCCCGTTCACGCACGGGCCG
GGTGGTACTTCTCATGA

Upstream 100 bases:

>100_bases
GACCTTGCACCAGCGTCTGGACAAAACCCGCCAGCTTAAACAGGGGATGATGCAGGAGCTGTTAACCGGGAAAACCCGCT
TAATATAGAAGGGAACGCAC

Downstream 100 bases:

>100_bases
TCACATATACACAAGGCAATTTACTGGACGCGCCCGTGGAAGCACTGGTGAATACGGTGAATACCGTCGGTGTCATGGGT
AAAGGCATCGCGCTGATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAYDYSANLNPEKALIWRIVHRDNIPWILDHGLHCGNSPVQAANWINIGNPELIGKRAGHPVPVGMGGTLHDYVPFYFTP
FSPMLMNIHSGRGGITQRPNEEIVILVSNLRNVAAQNIPFVFTDSHAYYNWVNYYTRLDDLNQIDWSILQARDFRRDPDD
PAKFERYQAEALIWKHCPITLLVGMICYNDGVRLQLEQWLSQRNLTMPVHARAGWYFS

Sequences:

>Translated_218_residues
MAYDYSANLNPEKALIWRIVHRDNIPWILDHGLHCGNSPVQAANWINIGNPELIGKRAGHPVPVGMGGTLHDYVPFYFTP
FSPMLMNIHSGRGGITQRPNEEIVILVSNLRNVAAQNIPFVFTDSHAYYNWVNYYTRLDDLNQIDWSILQARDFRRDPDD
PAKFERYQAEALIWKHCPITLLVGMICYNDGVRLQLEQWLSQRNLTMPVHARAGWYFS
>Mature_217_residues
AYDYSANLNPEKALIWRIVHRDNIPWILDHGLHCGNSPVQAANWINIGNPELIGKRAGHPVPVGMGGTLHDYVPFYFTPF
SPMLMNIHSGRGGITQRPNEEIVILVSNLRNVAAQNIPFVFTDSHAYYNWVNYYTRLDDLNQIDWSILQARDFRRDPDDP
AKFERYQAEALIWKHCPITLLVGMICYNDGVRLQLEQWLSQRNLTMPVHARAGWYFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25179; Mature: 25048

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDYSANLNPEKALIWRIVHRDNIPWILDHGLHCGNSPVQAANWINIGNPELIGKRAGH
CCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEECCCHHEECCCCCC
PVPVGMGGTLHDYVPFYFTPFSPMLMNIHSGRGGITQRPNEEIVILVSNLRNVAAQNIPF
CCEECCCCCHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCE
VFTDSHAYYNWVNYYTRLDDLNQIDWSILQARDFRRDPDDPAKFERYQAEALIWKHCPIT
EEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHH
LLVGMICYNDGVRLQLEQWLSQRNLTMPVHARAGWYFS
HHHHHHHCCCCCEEEHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure 
AYDYSANLNPEKALIWRIVHRDNIPWILDHGLHCGNSPVQAANWINIGNPELIGKRAGH
CCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEECCCHHEECCCCCC
PVPVGMGGTLHDYVPFYFTPFSPMLMNIHSGRGGITQRPNEEIVILVSNLRNVAAQNIPF
CCEECCCCCHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCE
VFTDSHAYYNWVNYYTRLDDLNQIDWSILQARDFRRDPDDPAKFERYQAEALIWKHCPIT
EEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHH
LLVGMICYNDGVRLQLEQWLSQRNLTMPVHARAGWYFS
HHHHHHHCCCCCEEEHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA