The gene/protein map for NC_012779 is currently unavailable.
Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921282

Identifier: 238921282

GI number: 238921282

Start: 3310544

End: 3311539

Strand: Reverse

Name: 238921282

Synonym: NT01EI_3425

Alternate gene names: NA

Gene position: 3311539-3310544 (Counterclockwise)

Preceding gene: 238921283

Following gene: 238921281

Centisome position: 86.86

GC content: 62.25

Gene sequence:

>996_bases
ATGGGTGTTTCTCAAAGGATTAAAGGTTGGGCTGCGGCCTGTTTGCTGGCCGTTTCCTGCGTGGCTTCGCCGGCGTTTGC
CGCGCAGTCCGGTAAGGATATGAGCATTTGGTTTGACGTCGGCGGTCCGGTGGGCGAGTCCTACGTGACGGTGGTGCAGA
ATGGGGCCAAGCAGGCGGCCGAGGATCTGGGCGTCGATTTGCGTCTGGTTTACTCCGACTGGCAGCCGCAGAAGATGATC
GAAAACTTTAAGCAGGCGCTGGCGGCCAAGCCGACCGGCATCGTGGTGATCGGCCTGCCGGGCGATACTGCCTACCAGCC
GCTGATCAAGGAGGCCATCGATAAGGGGATCCTGGTGACCTCTATCGACACCGAGCTGCCGGGCACCATGGCAGCCGAGC
AGAGCAAGGGTTTTGGCTACGTTGGTGATAACAACGCGGTGCGCGGTCTGCGCCTGGCCAAAGAGGCGGTGCGCCGCAGC
GGGCTGAAGGCGGGCGATCGTGCGCTGGTGTGGGGGCTTAAAGATCGCGCCGCCCGCAGCGAGTCAACCCTGGGGCTGAT
TAAGGGGCTGGAGCAGGCCGGTGTCAAGGTCGACTTCCTGCAGATTTCGCCGGAGGTGGACAAAGATCCCTCTCTGGGTG
CACCGGCCTTTACCGCCTATATGGCGACCCACCCGGATGTGAAGATGGTACTGGTGGACCACGGTGCCCTGACCGCGCAG
ATGGGTAACCTGATGCGCAACGCCGGGATCAAGCCGGGCGAGGTCTACGTGGCCGGTTTCAGCCTGTCGCCGGCCACCGC
CGAGGCGATTAAATCCGGCTATGTGCAGCTGGTGGCCGATGCCCAGCCCTACCTGATGGGTTACTTCTCCGTGGTGCAGA
TCGTCCTGAGCAAGCGCTATGGCTTTTCCGGTCTGGATATCAACACCGGCGCCGGGTTTGTCTCTCAGGAGAATATCGGA
CTGATCGCGCCGCTGGCCAGCAAGGGTCTGCGTTGA

Upstream 100 bases:

>100_bases
GCGACAGCGACGCCGTTGTCTCCCTCGTCCCCGACTGCGGTCTGGTGGCGCCCGCTCCTGCGGCGGCCGTCATACCCTGC
CAATAATAAAGGTGATAATG

Downstream 100 bases:

>100_bases
TGACGCAGCCTGCGCTGGAACTGATCGGGCTGAACAAGTGGTTCGGCCCGGTTCATGCCCTGCGCGATATCCATTTTCAG
CTATTCCCCGGTGAGGTGGT

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGVSQRIKGWAAACLLAVSCVASPAFAAQSGKDMSIWFDVGGPVGESYVTVVQNGAKQAAEDLGVDLRLVYSDWQPQKMI
ENFKQALAAKPTGIVVIGLPGDTAYQPLIKEAIDKGILVTSIDTELPGTMAAEQSKGFGYVGDNNAVRGLRLAKEAVRRS
GLKAGDRALVWGLKDRAARSESTLGLIKGLEQAGVKVDFLQISPEVDKDPSLGAPAFTAYMATHPDVKMVLVDHGALTAQ
MGNLMRNAGIKPGEVYVAGFSLSPATAEAIKSGYVQLVADAQPYLMGYFSVVQIVLSKRYGFSGLDINTGAGFVSQENIG
LIAPLASKGLR

Sequences:

>Translated_331_residues
MGVSQRIKGWAAACLLAVSCVASPAFAAQSGKDMSIWFDVGGPVGESYVTVVQNGAKQAAEDLGVDLRLVYSDWQPQKMI
ENFKQALAAKPTGIVVIGLPGDTAYQPLIKEAIDKGILVTSIDTELPGTMAAEQSKGFGYVGDNNAVRGLRLAKEAVRRS
GLKAGDRALVWGLKDRAARSESTLGLIKGLEQAGVKVDFLQISPEVDKDPSLGAPAFTAYMATHPDVKMVLVDHGALTAQ
MGNLMRNAGIKPGEVYVAGFSLSPATAEAIKSGYVQLVADAQPYLMGYFSVVQIVLSKRYGFSGLDINTGAGFVSQENIG
LIAPLASKGLR
>Mature_330_residues
GVSQRIKGWAAACLLAVSCVASPAFAAQSGKDMSIWFDVGGPVGESYVTVVQNGAKQAAEDLGVDLRLVYSDWQPQKMIE
NFKQALAAKPTGIVVIGLPGDTAYQPLIKEAIDKGILVTSIDTELPGTMAAEQSKGFGYVGDNNAVRGLRLAKEAVRRSG
LKAGDRALVWGLKDRAARSESTLGLIKGLEQAGVKVDFLQISPEVDKDPSLGAPAFTAYMATHPDVKMVLVDHGALTAQM
GNLMRNAGIKPGEVYVAGFSLSPATAEAIKSGYVQLVADAQPYLMGYFSVVQIVLSKRYGFSGLDINTGAGFVSQENIGL
IAPLASKGLR

Specific function: Unknown

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34866; Mature: 34734

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSQRIKGWAAACLLAVSCVASPAFAAQSGKDMSIWFDVGGPVGESYVTVVQNGAKQAA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
EDLGVDLRLVYSDWQPQKMIENFKQALAAKPTGIVVIGLPGDTAYQPLIKEAIDKGILVT
HHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEE
SIDTELPGTMAAEQSKGFGYVGDNNAVRGLRLAKEAVRRSGLKAGDRALVWGLKDRAARS
EECCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCC
ESTLGLIKGLEQAGVKVDFLQISPEVDKDPSLGAPAFTAYMATHPDVKMVLVDHGALTAQ
HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHEECCCCEEEEEEECCHHHHH
MGNLMRNAGIKPGEVYVAGFSLSPATAEAIKSGYVQLVADAQPYLMGYFSVVQIVLSKRY
HHHHHHHCCCCCCEEEEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCC
GFSGLDINTGAGFVSQENIGLIAPLASKGLR
CCCCCEECCCCCCEECCCCCEEECHHHCCCC
>Mature Secondary Structure 
GVSQRIKGWAAACLLAVSCVASPAFAAQSGKDMSIWFDVGGPVGESYVTVVQNGAKQAA
CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
EDLGVDLRLVYSDWQPQKMIENFKQALAAKPTGIVVIGLPGDTAYQPLIKEAIDKGILVT
HHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEE
SIDTELPGTMAAEQSKGFGYVGDNNAVRGLRLAKEAVRRSGLKAGDRALVWGLKDRAARS
EECCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCC
ESTLGLIKGLEQAGVKVDFLQISPEVDKDPSLGAPAFTAYMATHPDVKMVLVDHGALTAQ
HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHEECCCCEEEEEEECCHHHHH
MGNLMRNAGIKPGEVYVAGFSLSPATAEAIKSGYVQLVADAQPYLMGYFSVVQIVLSKRY
HHHHHHHCCCCCCEEEEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCC
GFSGLDINTGAGFVSQENIGLIAPLASKGLR
CCCCCEECCCCCCEECCCCCEEECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA