Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921283
Identifier: 238921283
GI number: 238921283
Start: 3311778
End: 3311915
Strand: Reverse
Name: 238921283
Synonym: NT01EI_3426
Alternate gene names: NA
Gene position: 3311915-3311778 (Counterclockwise)
Preceding gene: 238921285
Following gene: 238921282
Centisome position: 86.87
GC content: 62.32
Gene sequence:
>138_bases ATGGCCGGGCCTGGGCGGGGATCCGCCCGCCCCACGGCGATACATGATTATTTTATCGGCTTTTTTATCGATGATTTTAT CGGGCGCCCGCCCGCGGCGTGCGTCGCCGAACGGTGGGTGTTTTCCCGCAGGGGTTGA
Upstream 100 bases:
>100_bases TCGCTGGTCTGCAGTTTATTGCCCTTCAGCGCATCCTTAATACGCTCAACCAGAATGGCAGCCTGTGATTTGGACATGGT CGTTTCCTTAAATGGTGAAA
Downstream 100 bases:
>100_bases CGCGGCGTGGACAATCCCTATTAACAGTCTACCGCAGACACCGCCAGAGTGGTATCACCCCGGGCGGTGCGGATGGGCTT TAGCTGAGGGATAAAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MAGPGRGSARPTAIHDYFIGFFIDDFIGRPPAACVAERWVFSRRG
Sequences:
>Translated_45_residues MAGPGRGSARPTAIHDYFIGFFIDDFIGRPPAACVAERWVFSRRG >Mature_44_residues AGPGRGSARPTAIHDYFIGFFIDDFIGRPPAACVAERWVFSRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4970; Mature: 4839
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPGRGSARPTAIHDYFIGFFIDDFIGRPPAACVAERWVFSRRG CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AGPGRGSARPTAIHDYFIGFFIDDFIGRPPAACVAERWVFSRRG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA