| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yjgA [C]
Identifier: 238921239
GI number: 238921239
Start: 3270635
End: 3271189
Strand: Direct
Name: yjgA [C]
Synonym: NT01EI_3382
Alternate gene names: 238921239
Gene position: 3270635-3271189 (Clockwise)
Preceding gene: 238921238
Following gene: 238921246
Centisome position: 85.79
GC content: 56.58
Gene sequence:
>555_bases ATGTACAAACATCCAGACGAAGAGTGGCTGGACGAGATCCCAGGCCAACAAGAGAACGAAGATGATGATGAAATCATCTG GGTCAGCAAAAGCGAAATCAAACGCGATGCCGAAGCCCTGAAAGCCCTGGGGGCCGAACTGGTGGATCTCGGGAAAAATG CGCTGGACCGCATCCCGCTGGATGAGGATCTGCGCGCCGCGATTGAGCTGGCGCAGCGCATCAAGAAAGAAGGGCGTCGT CGTCAGCTGCAGCTGATCGGAAAACTGCTGCGCCAACGCGATCCTGAGCCGATCCAAACAGCGCTGGATAAGCTGAAAAA CCGCCACAATCAGCAGGTTGCTCTGTTCCATAAGCTGGAGCAGCTGCGCGACCGTCTGATTAGCGATGGTGATGAAGCGA TCAGCGAGGTTTTGAACCTCTATCCCCACGCCGACCGCCAGCAGCTGCGTGCCCTGATCCGCAACGCTAAAAAAGAGCGG GACGGCAACAAGCCCCCCAAATCCGCACGCCAGATCTTCCAATATCTGCGCACGCTGGCAGAAGCAAACGACTGA
Upstream 100 bases:
>100_bases ACGGGTCATCCATCGACCACAGCGTTGGCGCGGGCCGATAATTGCGCGACACGCGCGCGTACACCTGTTAGGATGTGCGC CATTTTTTAAGGAAACTGCC
Downstream 100 bases:
>100_bases TACAACGCGCCTGCCGGCCGGTTGGCCGGTAGCGCTGTTTTCCACCGCGCTCAGGCCACCCTATCGTAGGTATTGAAGCG CAGCTCGCCCTCCAGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MYKHPDEEWLDEIPGQQENEDDDEIIWVSKSEIKRDAEALKALGAELVDLGKNALDRIPLDEDLRAAIELAQRIKKEGRR RQLQLIGKLLRQRDPEPIQTALDKLKNRHNQQVALFHKLEQLRDRLISDGDEAISEVLNLYPHADRQQLRALIRNAKKER DGNKPPKSARQIFQYLRTLAEAND
Sequences:
>Translated_184_residues MYKHPDEEWLDEIPGQQENEDDDEIIWVSKSEIKRDAEALKALGAELVDLGKNALDRIPLDEDLRAAIELAQRIKKEGRR RQLQLIGKLLRQRDPEPIQTALDKLKNRHNQQVALFHKLEQLRDRLISDGDEAISEVLNLYPHADRQQLRALIRNAKKER DGNKPPKSARQIFQYLRTLAEAND >Mature_184_residues MYKHPDEEWLDEIPGQQENEDDDEIIWVSKSEIKRDAEALKALGAELVDLGKNALDRIPLDEDLRAAIELAQRIKKEGRR RQLQLIGKLLRQRDPEPIQTALDKLKNRHNQQVALFHKLEQLRDRLISDGDEAISEVLNLYPHADRQQLRALIRNAKKER DGNKPPKSARQIFQYLRTLAEAND
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family
Homologues:
Organism=Escherichia coli, GI1790681, Length=181, Percent_Identity=81.2154696132597, Blast_Score=274, Evalue=3e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3382_EDWI9 (C5BAW4)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002934754.1 - ProteinModelPortal: C5BAW4 - GeneID: 7959681 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3382 - OMA: HEIELWR - ProtClustDB: PRK05255 - HAMAP: MF_00765 - InterPro: IPR023153 - InterPro: IPR006839 - PIRSF: PIRSF016183
Pfam domain/function: PF04751 DUF615
EC number: NA
Molecular weight: Translated: 21410; Mature: 21410
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKHPDEEWLDEIPGQQENEDDDEIIWVSKSEIKRDAEALKALGAELVDLGKNALDRIPL CCCCCCHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEDLRAAIELAQRIKKEGRRRQLQLIGKLLRQRDPEPIQTALDKLKNRHNQQVALFHKLE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH QLRDRLISDGDEAISEVLNLYPHADRQQLRALIRNAKKERDGNKPPKSARQIFQYLRTLA HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH EAND CCCC >Mature Secondary Structure MYKHPDEEWLDEIPGQQENEDDDEIIWVSKSEIKRDAEALKALGAELVDLGKNALDRIPL CCCCCCHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEDLRAAIELAQRIKKEGRRRQLQLIGKLLRQRDPEPIQTALDKLKNRHNQQVALFHKLE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH QLRDRLISDGDEAISEVLNLYPHADRQQLRALIRNAKKERDGNKPPKSARQIFQYLRTLA HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH EAND CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA