Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921238

Identifier: 238921238

GI number: 238921238

Start: 3270261

End: 3270575

Strand: Direct

Name: 238921238

Synonym: NT01EI_3381

Alternate gene names: NA

Gene position: 3270261-3270575 (Clockwise)

Preceding gene: 238921234

Following gene: 238921239

Centisome position: 85.78

GC content: 50.48

Gene sequence:

>315_bases
GTGTACAGCCCCTCTTTTAGCCACCGTCAGCAGATCAAAAAACATTTAACAAAATATTATACCCCCCTATCAGATCGTGA
ACCGTCAATTAAATATTATTATGTATTATTTATCAGAGGATTAATTTCAGTGCACTGTGCCGATCCACCGCTGACGCGCC
GGGACAGACAAAGCGTAACGCGCTATTTTCCGCCGCCGCTGCGCGGAGGGCTGGCGAACATTCCCTGCCGTAAAATAGGC
GCCGGGTATATACTGCTGCACGGGAAACCGTCTTACGGGTCATCCATCGACCACAGCGTTGGCGCGGGCCGATAA

Upstream 100 bases:

>100_bases
CTGACATAACTAACCTATATTAATTTAGACCGCGGCATTATAATTATATTGTCTATCGAGTCAAACCTATGACAAATTAA
TTTTCCGTGATCGCCGCTCC

Downstream 100 bases:

>100_bases
TTGCGCGACACGCGCGCGTACACCTGTTAGGATGTGCGCCATTTTTTAAGGAAACTGCCATGTACAAACATCCAGACGAA
GAGTGGCTGGACGAGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MYSPSFSHRQQIKKHLTKYYTPLSDREPSIKYYYVLFIRGLISVHCADPPLTRRDRQSVTRYFPPPLRGGLANIPCRKIG
AGYILLHGKPSYGSSIDHSVGAGR

Sequences:

>Translated_104_residues
MYSPSFSHRQQIKKHLTKYYTPLSDREPSIKYYYVLFIRGLISVHCADPPLTRRDRQSVTRYFPPPLRGGLANIPCRKIG
AGYILLHGKPSYGSSIDHSVGAGR
>Mature_104_residues
MYSPSFSHRQQIKKHLTKYYTPLSDREPSIKYYYVLFIRGLISVHCADPPLTRRDRQSVTRYFPPPLRGGLANIPCRKIG
AGYILLHGKPSYGSSIDHSVGAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11822; Mature: 11822

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSPSFSHRQQIKKHLTKYYTPLSDREPSIKYYYVLFIRGLISVHCADPPLTRRDRQSVT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
RYFPPPLRGGLANIPCRKIGAGYILLHGKPSYGSSIDHSVGAGR
HCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYSPSFSHRQQIKKHLTKYYTPLSDREPSIKYYYVLFIRGLISVHCADPPLTRRDRQSVT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
RYFPPPLRGGLANIPCRKIGAGYILLHGKPSYGSSIDHSVGAGR
HCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA