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The map label for this gene is yggE

Identifier: 238921221

GI number: 238921221

Start: 3250411

End: 3251130

Strand: Reverse

Name: yggE

Synonym: NT01EI_3364

Alternate gene names: 238921221

Gene position: 3251130-3250411 (Counterclockwise)

Preceding gene: 238921222

Following gene: 238921219

Centisome position: 85.28

GC content: 57.22

Gene sequence:

>720_bases
ATGAAATTAACAGTATTGGCCTTGGCTGCAATGATGGGTGTCGGTGGCATGGCCGCCAGTGTTCAGGCGGCGGAGGTCCC
AGAGGGGCCGCACGTAGTGACATCGGGTACCGCCAGCGTGGATGCCGTTCCCGACATGGCTACCCTGACCTTTCAGGTTA
ACGCCAGCGCTAAAGATGCCGCCGTTGCCAAGTCTCAGGTCGATCAGCGGGTAGCCAAATATTTTGACTTTTTGAAGCGT
AACGGCATCGACCCGCAGGATATCAGCGCCGCCAATCTGTATACCATGCCAGAGTATGAGTATCAGAAAGATGGGAAAAG
CCAGCTGAAGGGATACCGTGCCGTGCGTACCGTACAGGTGACGTTGCGTCAGCTGGATAAGCTTAACAGTCTGTTGGACG
GGGCGCTGAAGGCCAACCTTAATGAGATCCGCTCTGTCGAGCTGGGCGTTGCCAAGCCTGAGGTGTACCGCGATAAGGCG
CGCCAGATGGCGATCAGGAACGCGATATCCCAGGCGGAGTCCCTGGCGCAGGGGTTTGGGGTAACGTTGGGGCCGGTCTA
TAGCGTCCGTTATCACGTCTCCAACTTCCAGCCGGAGCCGGAGACACGCATGTACGCGGCGGCGCCGTCCGCCAATCAAA
CCTCGGCGGCACAAACCTATGAGCAGCAGACGATTCACTTCGACGATCGGGTTGAGGTGGTGTTTAACCTGAGTAAATAA

Upstream 100 bases:

>100_bases
TTCGTCGGCGATCGGTCGGCGGGATAGGGTTGGACCTTAGGGTCTGGCGCATGACAGAGGGGAAGCCCCTGGCAACGTAG
TAGTGAACCGGAGGATAACC

Downstream 100 bases:

>100_bases
CGGGCCGATAGTGGGCGGGATCGATTGCCGATCCCGCGTTGCCGCGCGCAGCTCCAGTGTCTAGTCCTGGCGCAGCACGT
CGCGGCCGTGGCTTATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKLTVLALAAMMGVGGMAASVQAAEVPEGPHVVTSGTASVDAVPDMATLTFQVNASAKDAAVAKSQVDQRVAKYFDFLKR
NGIDPQDISAANLYTMPEYEYQKDGKSQLKGYRAVRTVQVTLRQLDKLNSLLDGALKANLNEIRSVELGVAKPEVYRDKA
RQMAIRNAISQAESLAQGFGVTLGPVYSVRYHVSNFQPEPETRMYAAAPSANQTSAAQTYEQQTIHFDDRVEVVFNLSK

Sequences:

>Translated_239_residues
MKLTVLALAAMMGVGGMAASVQAAEVPEGPHVVTSGTASVDAVPDMATLTFQVNASAKDAAVAKSQVDQRVAKYFDFLKR
NGIDPQDISAANLYTMPEYEYQKDGKSQLKGYRAVRTVQVTLRQLDKLNSLLDGALKANLNEIRSVELGVAKPEVYRDKA
RQMAIRNAISQAESLAQGFGVTLGPVYSVRYHVSNFQPEPETRMYAAAPSANQTSAAQTYEQQTIHFDDRVEVVFNLSK
>Mature_239_residues
MKLTVLALAAMMGVGGMAASVQAAEVPEGPHVVTSGTASVDAVPDMATLTFQVNASAKDAAVAKSQVDQRVAKYFDFLKR
NGIDPQDISAANLYTMPEYEYQKDGKSQLKGYRAVRTVQVTLRQLDKLNSLLDGALKANLNEIRSVELGVAKPEVYRDKA
RQMAIRNAISQAESLAQGFGVTLGPVYSVRYHVSNFQPEPETRMYAAAPSANQTSAAQTYEQQTIHFDDRVEVVFNLSK

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=237, Percent_Identity=68.3544303797468, Blast_Score=299, Evalue=1e-82,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): YGGE_EDWI9 (O52400)

Other databases:

- EMBL:   AF037440
- EMBL:   CP001600
- RefSeq:   YP_002934736.1
- GeneID:   7959663
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3364
- OMA:   RYHVANY
- ProtClustDB:   PRK11087
- InterPro:   IPR007497

Pfam domain/function: PF04402 DUF541

EC number: NA

Molecular weight: Translated: 26007; Mature: 26007

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTVLALAAMMGVGGMAASVQAAEVPEGPHVVTSGTASVDAVPDMATLTFQVNASAKDA
CCHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCHH
AVAKSQVDQRVAKYFDFLKRNGIDPQDISAANLYTMPEYEYQKDGKSQLKGYRAVRTVQV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHH
TLRQLDKLNSLLDGALKANLNEIRSVELGVAKPEVYRDKARQMAIRNAISQAESLAQGFG
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTLGPVYSVRYHVSNFQPEPETRMYAAAPSANQTSAAQTYEQQTIHFDDRVEVVFNLSK
CEECCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MKLTVLALAAMMGVGGMAASVQAAEVPEGPHVVTSGTASVDAVPDMATLTFQVNASAKDA
CCHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCHH
AVAKSQVDQRVAKYFDFLKRNGIDPQDISAANLYTMPEYEYQKDGKSQLKGYRAVRTVQV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHH
TLRQLDKLNSLLDGALKANLNEIRSVELGVAKPEVYRDKARQMAIRNAISQAESLAQGFG
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTLGPVYSVRYHVSNFQPEPETRMYAAAPSANQTSAAQTYEQQTIHFDDRVEVVFNLSK
CEECCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12542086