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The map label for this gene is ygfY [H]

Identifier: 238921203

GI number: 238921203

Start: 3229342

End: 3229608

Strand: Reverse

Name: ygfY [H]

Synonym: NT01EI_3345

Alternate gene names: 238921203

Gene position: 3229608-3229342 (Counterclockwise)

Preceding gene: 238921205

Following gene: 238921202

Centisome position: 84.72

GC content: 49.44

Gene sequence:

>267_bases
ATGGATATCAATAATAAAGCGCGGGTTCACTGGGCGTGCCGCCGCGGAATGCGTGAGCTGGATATCGCCATTATGCCTTT
CTTTGAACATGAGTATGATGCGCTTAACGATGCCGATAAACAGACCTTTGTCCGACTGCTGTCCTGTGACGATCCTGAAC
TATTTAAATGGCTGATGAACCAGGGTAAGCCGGACGATACCGATCTGGCCCGTATGATTACGCTGATTCAGACGCGAAAT
AAAGAACGTGGCCCTTTGGCGCTGTAA

Upstream 100 bases:

>100_bases
AATAGAGTCAGATTAGCGCGGGATTCTGCCAGCGATGTCGGCGTGTGGGTCTGCGTCCCGTCAGTTACCAAATAGAAACC
GAAACCGGAGTGGATGAGTC

Downstream 100 bases:

>100_bases
TGTTCACGCCTCCTGGCGTACCCAGGTGATGTTTCTGCTGGGGCATGGCGCGCTGGTATTGGCGATCCTGTTGGCGCCCT
GGCCGGAAAACTACAGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLSCDDPELFKWLMNQGKPDDTDLARMITLIQTRN
KERGPLAL

Sequences:

>Translated_88_residues
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLSCDDPELFKWLMNQGKPDDTDLARMITLIQTRN
KERGPLAL
>Mature_88_residues
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLSCDDPELFKWLMNQGKPDDTDLARMITLIQTRN
KERGPLAL

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family [H]

Homologues:

Organism=Escherichia coli, GI1789264, Length=88, Percent_Identity=73.8636363636364, Blast_Score=149, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005631 [H]

Pfam domain/function: PF03937 DUF339 [H]

EC number: NA

Molecular weight: Translated: 10365; Mature: 10365

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLSCDDPELFKWLMN
CCCCCCHHHHHHHHCCHHHHCHHCCCCCCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
QGKPDDTDLARMITLIQTRNKERGPLAL
CCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLSCDDPELFKWLMN
CCCCCCHHHHHHHHCCHHHHCHHCCCCCCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
QGKPDDTDLARMITLIQTRNKERGPLAL
CCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]