Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921190
Identifier: 238921190
GI number: 238921190
Start: 3219400
End: 3219540
Strand: Reverse
Name: 238921190
Synonym: NT01EI_3331
Alternate gene names: NA
Gene position: 3219540-3219400 (Counterclockwise)
Preceding gene: 238921191
Following gene: 238921189
Centisome position: 84.45
GC content: 53.9
Gene sequence:
>141_bases GTGTTTCCGACGGATGACCCGGTGAAAATGGTAGTGTGGCTGGCAATCCAGGCGGCGTTACAGAAATGGACGATGTCGCT GAGAGACTCAATAAGCCGCTTTATTATCGGGTTCGCTGACCGCCTGGACGCTCAACTCTGA
Upstream 100 bases:
>100_bases TAAATTGTTATAGCTTTCTATTAGTCAATTGAACTCAATGCGACTCCCTCAGAGTCAACCCGAATGTAGGGGATGGATGC AGTCTATCAGGAAACAGAAC
Downstream 100 bases:
>100_bases GAAAAGGCATTTACACAGAATCAGGTATAGACTCTGATTTATAGGCATCGCTTTACTGTCATTTATTACTATAAACGGGG GGCTGCGGGCCCTGACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MFPTDDPVKMVVWLAIQAALQKWTMSLRDSISRFIIGFADRLDAQL
Sequences:
>Translated_46_residues MFPTDDPVKMVVWLAIQAALQKWTMSLRDSISRFIIGFADRLDAQL >Mature_46_residues MFPTDDPVKMVVWLAIQAALQKWTMSLRDSISRFIIGFADRLDAQL
Specific function: Unknown
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5296; Mature: 5296
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPTDDPVKMVVWLAIQAALQKWTMSLRDSISRFIIGFADRLDAQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFPTDDPVKMVVWLAIQAALQKWTMSLRDSISRFIIGFADRLDAQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA