Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921180
Identifier: 238921180
GI number: 238921180
Start: 3203488
End: 3203649
Strand: Reverse
Name: 238921180
Synonym: NT01EI_3321
Alternate gene names: NA
Gene position: 3203649-3203488 (Counterclockwise)
Preceding gene: 238921181
Following gene: 238921179
Centisome position: 84.03
GC content: 35.8
Gene sequence:
>162_bases GTGGTGGGGAGTATTGGGGGAAAAGCTATTGATTTATTACCTCCAGTAAAAAATAAAACCGCAAAGAATATTATTGGCGC AACCACTAGTTCTACTCTTACTGAGATGACTGGAGGTGTTGTAAAAGATAACTTAGACCAGAGTAATAATGATGATAATT AA
Upstream 100 bases:
>100_bases GCAGGCTTCCGCAGCCATTAATATGGGTGGGGCCGCCGTTGGCAGTGCACTTAAAGGAGAGGATCCAACTAATGCAGTGA TCGGAGCTGGAATTGGTAGT
Downstream 100 bases:
>100_bases GTTTAAAAAAGTAGGCGCCTCTTGGTTTTTGTTTTTAATTTCTTATTGTGTGCTTTTAATTTCACTCGCGCTATTTTTGT ATGTGTTGGTAATGTCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MVGSIGGKAIDLLPPVKNKTAKNIIGATTSSTLTEMTGGVVKDNLDQSNNDDN
Sequences:
>Translated_53_residues MVGSIGGKAIDLLPPVKNKTAKNIIGATTSSTLTEMTGGVVKDNLDQSNNDDN >Mature_53_residues MVGSIGGKAIDLLPPVKNKTAKNIIGATTSSTLTEMTGGVVKDNLDQSNNDDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5445; Mature: 5445
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSIGGKAIDLLPPVKNKTAKNIIGATTSSTLTEMTGGVVKDNLDQSNNDDN CCCCCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVGSIGGKAIDLLPPVKNKTAKNIIGATTSSTLTEMTGGVVKDNLDQSNNDDN CCCCCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA