Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921179

Identifier: 238921179

GI number: 238921179

Start: 3202114

End: 3203205

Strand: Reverse

Name: 238921179

Synonym: NT01EI_3320

Alternate gene names: NA

Gene position: 3203205-3202114 (Counterclockwise)

Preceding gene: 238921180

Following gene: 238921178

Centisome position: 84.02

GC content: 64.93

Gene sequence:

>1092_bases
GTGGCGAATGTCGGCAATAATCTGACCCTACGCAGTGAACAGGGGGTTGATAGCTATGAGGCCAAGCAATCCAGCTTCAG
CGCCGGGGGGAGCATCGGCTTCGGCAATGGCTCTCTGGGTATCGCCGCCAGCCGCGATAAGATGCACAGCGACTATGCCT
CGGTGGAGAGCCAGAGCGGCATCTTTGCCGGTACCGGTGGCTTTGATATCACCGTGGGTAATCATACCCAGCTGGACGGC
GCGGCCATTGCCAGCGCGGCCGGTCAGGAGAACAACCGCTTAGATAGCGGAACCCTGGGCTTTGCCGATATCGACAACCG
CGCTGAGTTCAGGGCACAGCACCAGGGGTTTGGCCTTAGCTCCGGCGGCAGCATTGGCGGCCAGTTCGCGGGCAATATGG
CCAATAGCCTGTTGGCGGGCGCCAATCATCAGGAGCGCGCCCGCGGCACCACCCAGTCGGCTATCGCCGACGGCGCGATC
GTCGTGCGCGATCGGGCCAACCAGCAGCAGGATGTCGCCGGGTTAGCGCGCGACACGGAGCAGGCGCACCAGCCTCTCTC
CCCTATCTTCGACAAGGAGAAAGCGCAGCGGCGCCTGCAGCAGGCCCGGCTGATCGGTGAGATTGGCAATCAGGTGGCCG
ATATTGCGCGGACAGAGGGCGAGATCGCCGGGGAAAAAGCCCGGCGTGACCCGACGGCCCTGAATCAGGCGCGTACCGCA
CTGGAAGCCAGCGGTAAACCGTTTACCGAGAAGGATGTAGCGCAGCGGGCGTATAACACCGGCATGCGCGATTCCGGGTT
TGGCACCGGAGGGCAATACCAGCAGGCGATTCAGGCGGCCACGGCGGCGGTACAGGGGCTGGCGGGCGGCAACCTGCAGG
CGGCGCTGGCGGGCGGCGCGGCGCCGTATATTAGTGAGATAATCAAGCAGAGCACCCCGGACGGCGCGGGGCGTGTGGCG
GCCCATGCGGTGGTAAACGCGGCGCTTGCCGCAGCACAGGGGAATCATCCCCTTGCCGGAGCCGCAGGTGCGGCCTCCGG
CGAAATCGTCGGCCATGCTGGCCACGGAGATATACCAGAAACCGGTCGCTGA

Upstream 100 bases:

>100_bases
TAGGTATAGGCCTTTGGCTAAAAGATAAACTATATGAATATAAGAGTAAGAAAGAGAAGACACCACCCTGAAGGGGGCGC
AGGTACAGGGGGAGAACGTG

Downstream 100 bases:

>100_bases
GCTCAGCGAAAGCGAGAAACAGACCGTTTCAACACTGGCCACCGTTGCCGCCGGACTGGCCGGCGGTCTGGTGGGCGACG
CGGGGGCCTCTGCGCTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Filamentous Hemagglutinin; Filamentous Haemagglutinin Outer Membrane Protein; Hemagglutinin-Related Protein; Adhesin/Hemagglutinin; Adhesin/Hemolysin; Adhesin; Hemolysin; Hemagglutinin/Hemolysin-Related Protein; Filamentous Haemagglutinin; Large Exoprotein Involved In Heme Utilization Or Adhesion; ShlA/HecA/FhaA Exofamily Protein; Cell Surface Protein; Adhesin HecA Family; Adhesin/Hemagglutinin/Hemolysin; Hemolysin/Hemagglutinin-Like Protein; Contact-Dependent Inhibitor A; FhaB Protein; Adhesin/Haemagluttinin; Filamentous Hemagglutinin/Adhesin; Filamentous Haemagglutinin Family Protein; Contact-Dependent Inhibition Of Growth Factor CdiA; Exoprotein Adhesin Or Hemolysin; Filamentous Haemagglutinin Adhesin HecA; Member Of ShlA/HecA/FhaA Exoprotein Family; Haemolysin-Like Protein; Hemolysin/Hemagglutinin-Like Protein HecA; Haemolysin/Haemagglutinin; AT-2 Family Transporter; Cell Surface Haemagluttinin Protein; Adhesin/Hemolysin Adhesin HecA; Filamentous Hemagglutinin / Adhesin; Hemagglutinin/Adhesin Repeat-Containing Protein; Hemagglutinin/Hemolysin Family Protein; Hemagglutinin/Hemolysin- Related Exoprotein; Fimbrial Adhesin

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MANVGNNLTLRSEQGVDSYEAKQSSFSAGGSIGFGNGSLGIAASRDKMHSDYASVESQSGIFAGTGGFDITVGNHTQLDG
AAIASAAGQENNRLDSGTLGFADIDNRAEFRAQHQGFGLSSGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAI
VVRDRANQQQDVAGLARDTEQAHQPLSPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKARRDPTALNQARTA
LEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGLAGGNLQAALAGGAAPYISEIIKQSTPDGAGRVA
AHAVVNAALAAAQGNHPLAGAAGAASGEIVGHAGHGDIPETGR

Sequences:

>Translated_363_residues
MANVGNNLTLRSEQGVDSYEAKQSSFSAGGSIGFGNGSLGIAASRDKMHSDYASVESQSGIFAGTGGFDITVGNHTQLDG
AAIASAAGQENNRLDSGTLGFADIDNRAEFRAQHQGFGLSSGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAI
VVRDRANQQQDVAGLARDTEQAHQPLSPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKARRDPTALNQARTA
LEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGLAGGNLQAALAGGAAPYISEIIKQSTPDGAGRVA
AHAVVNAALAAAQGNHPLAGAAGAASGEIVGHAGHGDIPETGR
>Mature_362_residues
ANVGNNLTLRSEQGVDSYEAKQSSFSAGGSIGFGNGSLGIAASRDKMHSDYASVESQSGIFAGTGGFDITVGNHTQLDGA
AIASAAGQENNRLDSGTLGFADIDNRAEFRAQHQGFGLSSGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAIV
VRDRANQQQDVAGLARDTEQAHQPLSPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKARRDPTALNQARTAL
EASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGLAGGNLQAALAGGAAPYISEIIKQSTPDGAGRVAA
HAVVNAALAAAQGNHPLAGAAGAASGEIVGHAGHGDIPETGR

Specific function: Unknown

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36900; Mature: 36768

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVGNNLTLRSEQGVDSYEAKQSSFSAGGSIGFGNGSLGIAASRDKMHSDYASVESQSG
CCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEECCCCCCCEEECHHHHHHHHHHHHCCCC
IFAGTGGFDITVGNHTQLDGAAIASAAGQENNRLDSGTLGFADIDNRAEFRAQHQGFGLS
EEEECCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
SGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRANQQQDVAGLARDTE
CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
QAHQPLSPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKARRDPTALNQARTA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHCCCHHHHHHHHHH
LEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGLAGGNLQAALAGGA
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
APYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNHPLAGAAGAASGEIVGHAGHGDIPE
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
TGR
CCC
>Mature Secondary Structure 
ANVGNNLTLRSEQGVDSYEAKQSSFSAGGSIGFGNGSLGIAASRDKMHSDYASVESQSG
CCCCCCEEEECCCCCCHHHHHHHHCCCCCCEECCCCCCCEEECHHHHHHHHHHHHCCCC
IFAGTGGFDITVGNHTQLDGAAIASAAGQENNRLDSGTLGFADIDNRAEFRAQHQGFGLS
EEEECCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
SGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRANQQQDVAGLARDTE
CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
QAHQPLSPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKARRDPTALNQARTA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHCCCHHHHHHHHHH
LEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGLAGGNLQAALAGGA
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
APYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNHPLAGAAGAASGEIVGHAGHGDIPE
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
TGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA