| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is suhB [H]
Identifier: 238921056
GI number: 238921056
Start: 3065684
End: 3066487
Strand: Direct
Name: suhB [H]
Synonym: NT01EI_3186
Alternate gene names: 238921056
Gene position: 3065684-3066487 (Clockwise)
Preceding gene: 238921044
Following gene: 238921057
Centisome position: 80.42
GC content: 59.58
Gene sequence:
>804_bases ATGCATCCGATGCTGAACATCGCCGTGCGCGCCGCGCGCAAGGCCGGTAACCTGATTGCCAAAAGTTACGAAACGCCCGA CTCAATAGAAGCCAGCCAGAAAGGCAGCAATGATTTTGTGACCAATGTCGATCGCGATGCTGAACACCTGATCATCGAGA CCATCCGCAAGTCTTACCCCAAGCACACTATCATCAGCGAAGAGTGCGGTGAGCTGCTGGGTGAAGATCACGAGATCCAA TGGGTAATCGATCCGCTGGATGGCACCACCAATTTCGTCAAACGTCTGCCGCACTTCGCAGTGTCCATCGCCGTACGTAT CAAAGGCCGTACCGAAGTTGCCGTCGTCTATGATCCGATGCGCAACGAGCTGTATACCGCCACCCGTGGTCAGGGCGCGC AGCTCAACGGCTACCGCCTGCGCACCGGCGTTGCCAAAGATCTGGATGGCACCATCCTGGCCACCGGTTTCCCCTTCAAG ATGAAGCATCATGCCGCCACCTATATCAAGATGGTCGATAAGCTGTTTACCCAGTGCGCTGACTTCCGCCGCACCGGCTC TGCTGCGCTGGATCTGGCCTACGTCGCCGCCGGCCGCGTGGACGGTTTCTTTGAAATCGGCCTGAAGCCATGGGACTTCG CCGCCGGTGAGCTGTTGGTGCGCGAAGCGGGCGGCCTGGTTACCGACTTTGTCGGCGGCCATGGCTACCTGGCCAGCGGT AACGTCGTCGCCGGTAACCCGCGCGTCGTCAAGTCGCTGCTGGGCGCTCTGCGCGACGAGCTGAGCGATGCGCTGAAGCG TTAA
Upstream 100 bases:
>100_bases TGCCAACGAGTATAAAAACGGCATGGTTGTTTGCCGCACACTTTGCTATACTCTGCGCCGTCTAAATTTCCCGTTCTTTA ACATCTAGTGGAAGATTCCC
Downstream 100 bases:
>100_bases TCGCCTGCCCGAAAGGGCACCAATGCGTCATTTTCAACGCCCTGCCGGAACGCCCGCGCAGGGCATTTTGTTTTTACACC CGCCATCGCGCATGAGTCCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHPMLNIAVRAARKAGNLIAKSYETPDSIEASQKGSNDFVTNVDRDAEHLIIETIRKSYPKHTIISEECGELLGEDHEIQ WVIDPLDGTTNFVKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELYTATRGQGAQLNGYRLRTGVAKDLDGTILATGFPFK MKHHAATYIKMVDKLFTQCADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGLVTDFVGGHGYLASG NVVAGNPRVVKSLLGALRDELSDALKR
Sequences:
>Translated_267_residues MHPMLNIAVRAARKAGNLIAKSYETPDSIEASQKGSNDFVTNVDRDAEHLIIETIRKSYPKHTIISEECGELLGEDHEIQ WVIDPLDGTTNFVKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELYTATRGQGAQLNGYRLRTGVAKDLDGTILATGFPFK MKHHAATYIKMVDKLFTQCADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGLVTDFVGGHGYLASG NVVAGNPRVVKSLLGALRDELSDALKR >Mature_267_residues MHPMLNIAVRAARKAGNLIAKSYETPDSIEASQKGSNDFVTNVDRDAEHLIIETIRKSYPKHTIISEECGELLGEDHEIQ WVIDPLDGTTNFVKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELYTATRGQGAQLNGYRLRTGVAKDLDGTILATGFPFK MKHHAATYIKMVDKLFTQCADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGLVTDFVGGHGYLASG NVVAGNPRVVKSLLGALRDELSDALKR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=251, Percent_Identity=33.4661354581673, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI221625487, Length=251, Percent_Identity=33.4661354581673, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI7657236, Length=253, Percent_Identity=35.1778656126482, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI221625507, Length=140, Percent_Identity=36.4285714285714, Blast_Score=99, Evalue=3e-21, Organism=Escherichia coli, GI1788882, Length=267, Percent_Identity=83.1460674157303, Blast_Score=474, Evalue=1e-135, Organism=Escherichia coli, GI1790659, Length=207, Percent_Identity=27.536231884058, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193202572, Length=238, Percent_Identity=34.8739495798319, Blast_Score=150, Evalue=7e-37, Organism=Caenorhabditis elegans, GI193202570, Length=238, Percent_Identity=32.7731092436975, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321836, Length=234, Percent_Identity=32.0512820512821, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320493, Length=208, Percent_Identity=31.25, Blast_Score=105, Evalue=8e-24, Organism=Drosophila melanogaster, GI21357329, Length=251, Percent_Identity=36.2549800796813, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24664922, Length=262, Percent_Identity=31.2977099236641, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24664926, Length=227, Percent_Identity=32.5991189427313, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI21357303, Length=235, Percent_Identity=34.8936170212766, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI21357957, Length=279, Percent_Identity=32.6164874551971, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI24664918, Length=233, Percent_Identity=35.6223175965665, Blast_Score=131, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29230; Mature: 29230
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNIAVRAARKAGNLIAKSYETPDSIEASQKGSNDFVTNVDRDAEHLIIETIRKSYP CCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC KHTIISEECGELLGEDHEIQWVIDPLDGTTNFVKRLPHFAVSIAVRIKGRTEVAVVYDPM CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCHHEEEEEEEECCCEEEEEEECCC RNELYTATRGQGAQLNGYRLRTGVAKDLDGTILATGFPFKMKHHAATYIKMVDKLFTQCA CCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGLVTDFVGGHGYLASG HHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCEEECC NVVAGNPRVVKSLLGALRDELSDALKR CEEECCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPMLNIAVRAARKAGNLIAKSYETPDSIEASQKGSNDFVTNVDRDAEHLIIETIRKSYP CCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC KHTIISEECGELLGEDHEIQWVIDPLDGTTNFVKRLPHFAVSIAVRIKGRTEVAVVYDPM CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCHHEEEEEEEECCCEEEEEEECCC RNELYTATRGQGAQLNGYRLRTGVAKDLDGTILATGFPFKMKHHAATYIKMVDKLFTQCA CCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGLVTDFVGGHGYLASG HHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCEEECC NVVAGNPRVVKSLLGALRDELSDALKR CEEECCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]