Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238920992
Identifier: 238920992
GI number: 238920992
Start: 3009736
End: 3010203
Strand: Direct
Name: 238920992
Synonym: NT01EI_3122
Alternate gene names: NA
Gene position: 3009736-3010203 (Clockwise)
Preceding gene: 238920991
Following gene: 238920993
Centisome position: 78.95
GC content: 59.83
Gene sequence:
>468_bases ATGAACTTTGTTCAGGTCACCCCTGCCGCCAGTCAGCCAGGGCTGATTATCAGCAACCCCCCTTTCTTTCCCGATATCGA TACGCAGCACCTGCGCGCCGCCCAGCGACTGGACGGCACCATCACCAACGAACGGCTGCGTGAGGCGCTGTTGATTGCGC TGGCCAGCGTAAATGACGATCTGCGTGAGTGGCGGCTGGAGCAGGAGCAGCGCGGTGTAACCTGTATTCAGGAAACCACC AGCGAGCAACTGGATGGCGAAAGCGTCAACCTGCACCGTTACCGTCGCGCCGTATATAGCCTGACGCACGCCAACCTGCT GGAGCGCTACCGCAACTTTGACGCCACCGCCCACGGTAGCAAACTGGCGGAACAGAAGGAAAGCACCGCCGACGATCTGG CGCGCGATGCCCGCTTTGCCGTGCGGGATATTCTGGGCAAGCCGCGCAGTACTTTCATCCTTATTTAA
Upstream 100 bases:
>100_bases CAGCCTACCGAGTGAGACCCTCACGCACGGCGGCACGGCTGGCTGCGCGTGGCTCTGCCATTGCAACGCCCACCGTCCAC CGCCGAACCGGGAGAATATA
Downstream 100 bases:
>100_bases ACCAACCGCTTCCGCTTGTACTGCCCTCAGTTACAAGCGGAAGCCTTCCCGTCACCTCCCGCCCCCGTGCCACTATCCCT GCATCACCTGACGCCGCGCG
Product: phage head completion protein (GPL)
Products: NA
Alternate protein names: Phage Head Completion; Head Completion/Stabilization Protein; Capsid Completion Protein; Phage Head Completion Protein; Phage Head Completion/Stabilization Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Head Completion/Stabilization Protein L; Bacteriophage Head Completion Protein L; Phage P2 Capsid Completion GpL-Like Protein; Phage-Related Capsid Completion Protein; Phage Head Completion Protein L; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNFVQVTPAASQPGLIISNPPFFPDIDTQHLRAAQRLDGTITNERLREALLIALASVNDDLREWRLEQEQRGVTCIQETT SEQLDGESVNLHRYRRAVYSLTHANLLERYRNFDATAHGSKLAEQKESTADDLARDARFAVRDILGKPRSTFILI
Sequences:
>Translated_155_residues MNFVQVTPAASQPGLIISNPPFFPDIDTQHLRAAQRLDGTITNERLREALLIALASVNDDLREWRLEQEQRGVTCIQETT SEQLDGESVNLHRYRRAVYSLTHANLLERYRNFDATAHGSKLAEQKESTADDLARDARFAVRDILGKPRSTFILI >Mature_155_residues MNFVQVTPAASQPGLIISNPPFFPDIDTQHLRAAQRLDGTITNERLREALLIALASVNDDLREWRLEQEQRGVTCIQETT SEQLDGESVNLHRYRRAVYSLTHANLLERYRNFDATAHGSKLAEQKESTADDLARDARFAVRDILGKPRSTFILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17589; Mature: 17589
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFVQVTPAASQPGLIISNPPFFPDIDTQHLRAAQRLDGTITNERLREALLIALASVNDD CCEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH LREWRLEQEQRGVTCIQETTSEQLDGESVNLHRYRRAVYSLTHANLLERYRNFDATAHGS HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KLAEQKESTADDLARDARFAVRDILGKPRSTFILI HHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MNFVQVTPAASQPGLIISNPPFFPDIDTQHLRAAQRLDGTITNERLREALLIALASVNDD CCEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH LREWRLEQEQRGVTCIQETTSEQLDGESVNLHRYRRAVYSLTHANLLERYRNFDATAHGS HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KLAEQKESTADDLARDARFAVRDILGKPRSTFILI HHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA