| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is purK [H]
Identifier: 238920885
GI number: 238920885
Start: 2898109
End: 2899179
Strand: Direct
Name: purK [H]
Synonym: NT01EI_3012
Alternate gene names: 238920885
Gene position: 2898109-2899179 (Clockwise)
Preceding gene: 238920884
Following gene: 238920888
Centisome position: 76.02
GC content: 62.75
Gene sequence:
>1071_bases ATGAAGCCGGTTTGCGTACTGGGCGACGGTCAGCTGGGGCGCATGCTGCGTCAGGCCGGAGAGCCGCTGGGGATCCCGGT CTACCCGGTGGGTATCGAGGCCGATCCGCACAGCGTCCCCTGGCGGCAGGCGGTGATCAGTGCCGAAATCGAGCGCTGGC CCGATACGCCACTGACCCGCGAATTGGCCCGCCACCCGGGCTTTATCAACCGCGACATCTTCCCACTGCTGGCCGATCGC TACAGCCAAAAGCAATTGCTGGACGAACTGGGCCTGCCGACGGCGCCCTGGGCGCTGCTGGCCGCGCCAGAACAGTGGCC CGCCCTGCTTGAACGTCTCGGCCCGCTGGCCATCGTCAAACGCCGCACCGGCGGCTATGACGGACGCGGTCAATGGCATA TTCGTCCCGGCAATGAAACCCAGCTTGATGACGAGATCTACGGGCAGTGTATCGTCGAGCAAGGGATAAACTTCATCGGC GAGGTCTCACTGATCGGCGCCCGCGCTCAGGATGGCCGCTGCGTCTTCTATCCCCTCACCCATAACCTGCACCAGGAGGG CATTCTGCGCGCCAGCCTGGTCTTTCCACAGCCGGAAAGCTTTCTACAGGAGAAGGCGCAGATGATGCTACAGCGCATCA TGCAGCATCTGGAGTACGTCGGCGTCATGGCGATGGAGTGTTTCGTGGTGGATGATGACACGCTGCTGATTAACGAACTG GCACCGCGCGTACACAACAGCGGGCATTGGACACAGAACGGCGCTTCGATAAGCCAGTTTGAGCTGCACCTGCGTGCACT GCTTGGCCTGCCTTTGCCGCACCCGGATGTCTCCACCCCCTCCGTGATGATCAACCTGATCGGCACCGCGCTGAATAACG CGTGGTTGGATGGCCCGCTGGTACACCTGCACTGGTATGATAAGGCGGTCCATCCGGGACGCAAGGTGGGCCACCTCAAC CTGAACCACTTTCAATCCCAGCGGCTGGTCAGCGCCCTGGATACCCTGCGCGGCCAGCTGCCGGCAGAGTACCGGGACAT CCTGGCCTGGGCCAGTACACGGCTGAGCTGA
Upstream 100 bases:
>100_bases TCCTGGCACTGCATGATGCAGACTTGAGCCGCCGCCTGACCACCTGGCGCCAGGCGCAGACAGATGAGGTACTCAACCAC CCCGACCCGCGGGAGGACGC
Downstream 100 bases:
>100_bases GCGTCAGCGCGCAGGGGGGCGGCGCAGCAGCCCTCTCCCCAACCCGGCGCCACACCCCCCTAACAGCAGCGCAGCACCCG GCGGCAGCAGTAGCCACACC
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKPVCVLGDGQLGRMLRQAGEPLGIPVYPVGIEADPHSVPWRQAVISAEIERWPDTPLTRELARHPGFINRDIFPLLADR YSQKQLLDELGLPTAPWALLAAPEQWPALLERLGPLAIVKRRTGGYDGRGQWHIRPGNETQLDDEIYGQCIVEQGINFIG EVSLIGARAQDGRCVFYPLTHNLHQEGILRASLVFPQPESFLQEKAQMMLQRIMQHLEYVGVMAMECFVVDDDTLLINEL APRVHNSGHWTQNGASISQFELHLRALLGLPLPHPDVSTPSVMINLIGTALNNAWLDGPLVHLHWYDKAVHPGRKVGHLN LNHFQSQRLVSALDTLRGQLPAEYRDILAWASTRLS
Sequences:
>Translated_356_residues MKPVCVLGDGQLGRMLRQAGEPLGIPVYPVGIEADPHSVPWRQAVISAEIERWPDTPLTRELARHPGFINRDIFPLLADR YSQKQLLDELGLPTAPWALLAAPEQWPALLERLGPLAIVKRRTGGYDGRGQWHIRPGNETQLDDEIYGQCIVEQGINFIG EVSLIGARAQDGRCVFYPLTHNLHQEGILRASLVFPQPESFLQEKAQMMLQRIMQHLEYVGVMAMECFVVDDDTLLINEL APRVHNSGHWTQNGASISQFELHLRALLGLPLPHPDVSTPSVMINLIGTALNNAWLDGPLVHLHWYDKAVHPGRKVGHLN LNHFQSQRLVSALDTLRGQLPAEYRDILAWASTRLS >Mature_356_residues MKPVCVLGDGQLGRMLRQAGEPLGIPVYPVGIEADPHSVPWRQAVISAEIERWPDTPLTRELARHPGFINRDIFPLLADR YSQKQLLDELGLPTAPWALLAAPEQWPALLERLGPLAIVKRRTGGYDGRGQWHIRPGNETQLDDEIYGQCIVEQGINFIG EVSLIGARAQDGRCVFYPLTHNLHQEGILRASLVFPQPESFLQEKAQMMLQRIMQHLEYVGVMAMECFVVDDDTLLINEL APRVHNSGHWTQNGASISQFELHLRALLGLPLPHPDVSTPSVMINLIGTALNNAWLDGPLVHLHWYDKAVHPGRKVGHLN LNHFQSQRLVSALDTLRGQLPAEYRDILAWASTRLS
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=355, Percent_Identity=68.169014084507, Blast_Score=481, Evalue=1e-137, Organism=Escherichia coli, GI1788155, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324702, Length=369, Percent_Identity=28.1842818428184, Blast_Score=130, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 39907; Mature: 39907
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVCVLGDGQLGRMLRQAGEPLGIPVYPVGIEADPHSVPWRQAVISAEIERWPDTPLTR CCCEEEECCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHH ELARHPGFINRDIFPLLADRYSQKQLLDELGLPTAPWALLAAPEQWPALLERLGPLAIVK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHHHHHHHHCCCEEEEE RRTGGYDGRGQWHIRPGNETQLDDEIYGQCIVEQGINFIGEVSLIGARAQDGRCVFYPLT ECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHCCCEEEECCCCCCCEEEEECC HNLHQEGILRASLVFPQPESFLQEKAQMMLQRIMQHLEYVGVMAMECFVVDDDTLLINEL CCCCHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHH APRVHNSGHWTQNGASISQFELHLRALLGLPLPHPDVSTPSVMINLIGTALNNAWLDGPL HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE VHLHWYDKAVHPGRKVGHLNLNHFQSQRLVSALDTLRGQLPAEYRDILAWASTRLS EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKPVCVLGDGQLGRMLRQAGEPLGIPVYPVGIEADPHSVPWRQAVISAEIERWPDTPLTR CCCEEEECCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHH ELARHPGFINRDIFPLLADRYSQKQLLDELGLPTAPWALLAAPEQWPALLERLGPLAIVK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHHHHHHHHCCCEEEEE RRTGGYDGRGQWHIRPGNETQLDDEIYGQCIVEQGINFIGEVSLIGARAQDGRCVFYPLT ECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHCCCEEEECCCCCCCEEEEECC HNLHQEGILRASLVFPQPESFLQEKAQMMLQRIMQHLEYVGVMAMECFVVDDDTLLINEL CCCCHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHH APRVHNSGHWTQNGASISQFELHLRALLGLPLPHPDVSTPSVMINLIGTALNNAWLDGPL HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE VHLHWYDKAVHPGRKVGHLNLNHFQSQRLVSALDTLRGQLPAEYRDILAWASTRLS EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2464576; 2644189; 9278503; 1534690; 10569930 [H]