| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920845
Identifier: 238920845
GI number: 238920845
Start: 2858450
End: 2859271
Strand: Direct
Name: 238920845
Synonym: NT01EI_2971
Alternate gene names: NA
Gene position: 2858450-2859271 (Clockwise)
Preceding gene: 238920843
Following gene: 238920846
Centisome position: 74.98
GC content: 65.45
Gene sequence:
>822_bases ATGCTGATCGATGAAATAGACTTCGCCGCGCTGTACCGCCAGCAGCTGACGCAGGCACAGCGCACCGCCAAACCACCGGC GCACTGGGATCGCCGGGCGCAAGCCATGTCAGTCACCTGCGCCGTACCTCAGGATCCCTACTTGCAGCAGCTAACGGCGG CGATGGATCTGAGCCGGGCACAGACCCTGCTGGACGTCGGGTGCGGCCCCGGCAGCGTCTGTCTGGCGACGGCGCCACGC CTGCGCCAGGCCTATGGTCTGGACTACAGCAAGGGTATGCTGGCGGTCGCTGCCCTGCGCGCCGGCCACCTAAACCTGGA TAACGTCACACTGATACAGCGCGCCTGGGAGGAGCCTTGGGACGATATTCCCCGCTGCGACGTCGTCGTCGCCTCACGCT CGACCCTGGTCGACGACCTGCGCCCGGCGCTGGCCAAGCTTAATCGACACGCCCGCCAGTGGGTCTACACCACCCACCCG GTCAGCAGCAGCTTCGTTGATCCACAGATCCTACAGGCCATCGGCCGCCCGATCCGCGAGCTACCCAACTATATCTATGC CGTCAATATTCTCTACCAGATGGGGATCCACGCCAGCGTGAGCTTTATCGGCACCCCCGCCTGCCAACAGCACGCGGCGA CGGCAGCGCAGTTTGCCGATGCCATCGCGCTGGCCCTGGGCGAGGTCAGCCTGCAGGAGCGTCAGGCGCTGGAGGCCTAT TATCATCACTGCCGGCAGCGGGGACGCGCACCGGCCGGAGCACGACGTGACTGGGCGCTGATCGCCTGGCAACCGCAGCC ATTAACGGAGGATCGGGAATGA
Upstream 100 bases:
>100_bases ACGTCACGTTCGCCTCTTTTAATTATATAAATATATAGCGATGATGGCCTCTGCCCCAGGCGACCGCACTGGCGCAGACA CATCGCCAAGGAGATGGGTT
Downstream 100 bases:
>100_bases TTTTTATCAGCGACAGCCAGCTGGACGCCTGGCTGCAGGAGGATATCCAGGGGGGCGATATCACCACCCGCGCCCTGGGG ATCGGTGAACGGCACGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLIDEIDFAALYRQQLTQAQRTAKPPAHWDRRAQAMSVTCAVPQDPYLQQLTAAMDLSRAQTLLDVGCGPGSVCLATAPR LRQAYGLDYSKGMLAVAALRAGHLNLDNVTLIQRAWEEPWDDIPRCDVVVASRSTLVDDLRPALAKLNRHARQWVYTTHP VSSSFVDPQILQAIGRPIRELPNYIYAVNILYQMGIHASVSFIGTPACQQHAATAAQFADAIALALGEVSLQERQALEAY YHHCRQRGRAPAGARRDWALIAWQPQPLTEDRE
Sequences:
>Translated_273_residues MLIDEIDFAALYRQQLTQAQRTAKPPAHWDRRAQAMSVTCAVPQDPYLQQLTAAMDLSRAQTLLDVGCGPGSVCLATAPR LRQAYGLDYSKGMLAVAALRAGHLNLDNVTLIQRAWEEPWDDIPRCDVVVASRSTLVDDLRPALAKLNRHARQWVYTTHP VSSSFVDPQILQAIGRPIRELPNYIYAVNILYQMGIHASVSFIGTPACQQHAATAAQFADAIALALGEVSLQERQALEAY YHHCRQRGRAPAGARRDWALIAWQPQPLTEDRE >Mature_273_residues MLIDEIDFAALYRQQLTQAQRTAKPPAHWDRRAQAMSVTCAVPQDPYLQQLTAAMDLSRAQTLLDVGCGPGSVCLATAPR LRQAYGLDYSKGMLAVAALRAGHLNLDNVTLIQRAWEEPWDDIPRCDVVVASRSTLVDDLRPALAKLNRHARQWVYTTHP VSSSFVDPQILQAIGRPIRELPNYIYAVNILYQMGIHASVSFIGTPACQQHAATAAQFADAIALALGEVSLQERQALEAY YHHCRQRGRAPAGARRDWALIAWQPQPLTEDRE
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 30360; Mature: 30360
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDEIDFAALYRQQLTQAQRTAKPPAHWDRRAQAMSVTCAVPQDPYLQQLTAAMDLSRA CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH QTLLDVGCGPGSVCLATAPRLRQAYGLDYSKGMLAVAALRAGHLNLDNVTLIQRAWEEPW HHHHHCCCCCCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC DDIPRCDVVVASRSTLVDDLRPALAKLNRHARQWVYTTHPVSSSFVDPQILQAIGRPIRE CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHH LPNYIYAVNILYQMGIHASVSFIGTPACQQHAATAAQFADAIALALGEVSLQERQALEAY HHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHHCRQRGRAPAGARRDWALIAWQPQPLTEDRE HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MLIDEIDFAALYRQQLTQAQRTAKPPAHWDRRAQAMSVTCAVPQDPYLQQLTAAMDLSRA CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH QTLLDVGCGPGSVCLATAPRLRQAYGLDYSKGMLAVAALRAGHLNLDNVTLIQRAWEEPW HHHHHCCCCCCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC DDIPRCDVVVASRSTLVDDLRPALAKLNRHARQWVYTTHPVSSSFVDPQILQAIGRPIRE CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHH LPNYIYAVNILYQMGIHASVSFIGTPACQQHAATAAQFADAIALALGEVSLQERQALEAY HHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHHCRQRGRAPAGARRDWALIAWQPQPLTEDRE HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]