| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is lnt [H]
Identifier: 238920802
GI number: 238920802
Start: 2817004
End: 2818533
Strand: Direct
Name: lnt [H]
Synonym: NT01EI_2928
Alternate gene names: 238920802
Gene position: 2817004-2818533 (Clockwise)
Preceding gene: 238920801
Following gene: 238920803
Centisome position: 73.89
GC content: 63.86
Gene sequence:
>1530_bases ATGACCATCGCCGCTTTACTGCAACGCCAGCGGGTACGCGCCCCGCTGGCGCTGATAACCGGTGCCTGTGGCACCCTGGC CTTTTCGCCCTACGATTTTTGGCCCGCCGCGCTCATCTCTTTGTGTGGCCTGCTGGCCGTCACCCTCAACCGAACCTCCC GCCAGGCCATGCTGCTGGGCTTTCTGTGGGGGCTTGGACTGTTCGGCAGCGGCGTCAACTGGGTTTATGTCAGCATTGAA CAGTTTGGCGGTATGCCGACGCCGGTCAGTGTATCGCTGGTCGTGCTGCTGGCGGCCTACCTGGCGCTCTACCCGCTGCT GTTCTGCGCCGTTCTTAACCGCCTGTGGCCACGGACGACCGTCTGGCGTCTGGTCATTGCCGCCCCGGCGCTGTGGCAGG CCACGGAGTTCCTGCGCGGCTGGGTGCTGACCGGCTTCCCCTGGCTGCAGTTCGGCTACAGCCAGCTCAACGGTCCGCTG AAGGGCATTGCCCCGCTGGCCGGCGTGGATACCATCACCTATCTTCTGGTTATCATCAGCGGCCTGCTGGTGCTGGCGGT AGCCCGGCGTCGCCCCCTGGCATCCCTGCTGGCCCTGGTGCTGCTGTGCGCACCCTGGCCGCTGCGCCAGATACACTGGT ATCAAAGCCTGCCACAAAAAGCGGTCAATGTGGCCATGGTACAGGGCGATATCGCCCAGTCGATGAAGTGGGATCCCAAC GCACTGATCGCCTCGCTGCAGACCTACCTGGAGGCGACCCGCCCCTACCTGGGTAAAGCGCCCATCATCATCTGGCCCGA ATCGGCCATCGCCGATACCGAAGCCAACGAACAACCGTTTTTAACCATGATGGACCGTCTGCTGCGCGCCCACCACAGCA GCCTGATCACCGGACTGGTCGATGAGCGCCCGGGGTCGAACGGCATGCGTTTTTATAACTCGGTGATCGTTCTGGGCGGC GAGACACCTTACCAGTACCCGGCGCGCCAACGCTACAGCAAACACCATCTGGTGCCGTTTGGTGAGTTCGTACCAATGGA AGACCTGCTGCGACCGCTGGCGCCCTTCTTCAACCTGCCGATGTCCGCCTTCAGCCGCGGCAGCTACGTGCAGCCTGCGC TGCGGGTTCAGGGATACGATCTAACCACCGCAATCTGCTATGAGATCGTACTGGGCGAACAGGTGCGGGCCAACTTCCGC CCGAATACCGACTTCCTGCTTACCGTCTCCAACGACGCCTGGTTCGGCCACTCTATCGGCCCGTGGCAACACTTCCAGAT GGCGCGTATGCGGGCCCTGGAACTGGGACGGCCGCTGCTGCGGGCCACCAACAACGGCATCACCGCTGCCGTGGACGCCT CCGGTAACGTCATTGCCCACCTGCCGCAGTTTACCCGCAGTGTGCTGGAGGTGAACGTCACCCCGACCCGCGGCGAGACG CCCTATGCCCGCCTGGGCAGCATACCGCTGTGGCTGCTGAGTGCGCTAATGGGCGCGCTGGCGCTGATCTACGCCCTGCG CCGCCGCTGA
Upstream 100 bases:
>100_bases AAGGTCGCCATGGCCGACAGTCGACGTATCATACAGGTTCATGTCAAAATTCCGGATGCATCACCTCAACCGCAACTGGA CCTGGAACCCTGAATAACCG
Downstream 100 bases:
>100_bases GACCCGCCCTCCCCGAGTGCAGCCTTCGGGCTGCACTCGCTCACCGTTGGCACAATGCTTGCAGTCCTTTCCCCTGCGAT GCGCCTCCGCAGGGCTTTCT
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTIAALLQRQRVRAPLALITGACGTLAFSPYDFWPAALISLCGLLAVTLNRTSRQAMLLGFLWGLGLFGSGVNWVYVSIE QFGGMPTPVSVSLVVLLAAYLALYPLLFCAVLNRLWPRTTVWRLVIAAPALWQATEFLRGWVLTGFPWLQFGYSQLNGPL KGIAPLAGVDTITYLLVIISGLLVLAVARRRPLASLLALVLLCAPWPLRQIHWYQSLPQKAVNVAMVQGDIAQSMKWDPN ALIASLQTYLEATRPYLGKAPIIIWPESAIADTEANEQPFLTMMDRLLRAHHSSLITGLVDERPGSNGMRFYNSVIVLGG ETPYQYPARQRYSKHHLVPFGEFVPMEDLLRPLAPFFNLPMSAFSRGSYVQPALRVQGYDLTTAICYEIVLGEQVRANFR PNTDFLLTVSNDAWFGHSIGPWQHFQMARMRALELGRPLLRATNNGITAAVDASGNVIAHLPQFTRSVLEVNVTPTRGET PYARLGSIPLWLLSALMGALALIYALRRR
Sequences:
>Translated_509_residues MTIAALLQRQRVRAPLALITGACGTLAFSPYDFWPAALISLCGLLAVTLNRTSRQAMLLGFLWGLGLFGSGVNWVYVSIE QFGGMPTPVSVSLVVLLAAYLALYPLLFCAVLNRLWPRTTVWRLVIAAPALWQATEFLRGWVLTGFPWLQFGYSQLNGPL KGIAPLAGVDTITYLLVIISGLLVLAVARRRPLASLLALVLLCAPWPLRQIHWYQSLPQKAVNVAMVQGDIAQSMKWDPN ALIASLQTYLEATRPYLGKAPIIIWPESAIADTEANEQPFLTMMDRLLRAHHSSLITGLVDERPGSNGMRFYNSVIVLGG ETPYQYPARQRYSKHHLVPFGEFVPMEDLLRPLAPFFNLPMSAFSRGSYVQPALRVQGYDLTTAICYEIVLGEQVRANFR PNTDFLLTVSNDAWFGHSIGPWQHFQMARMRALELGRPLLRATNNGITAAVDASGNVIAHLPQFTRSVLEVNVTPTRGET PYARLGSIPLWLLSALMGALALIYALRRR >Mature_508_residues TIAALLQRQRVRAPLALITGACGTLAFSPYDFWPAALISLCGLLAVTLNRTSRQAMLLGFLWGLGLFGSGVNWVYVSIEQ FGGMPTPVSVSLVVLLAAYLALYPLLFCAVLNRLWPRTTVWRLVIAAPALWQATEFLRGWVLTGFPWLQFGYSQLNGPLK GIAPLAGVDTITYLLVIISGLLVLAVARRRPLASLLALVLLCAPWPLRQIHWYQSLPQKAVNVAMVQGDIAQSMKWDPNA LIASLQTYLEATRPYLGKAPIIIWPESAIADTEANEQPFLTMMDRLLRAHHSSLITGLVDERPGSNGMRFYNSVIVLGGE TPYQYPARQRYSKHHLVPFGEFVPMEDLLRPLAPFFNLPMSAFSRGSYVQPALRVQGYDLTTAICYEIVLGEQVRANFRP NTDFLLTVSNDAWFGHSIGPWQHFQMARMRALELGRPLLRATNNGITAAVDASGNVIAHLPQFTRSVLEVNVTPTRGETP YARLGSIPLWLLSALMGALALIYALRRR
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=512, Percent_Identity=63.671875, Blast_Score=669, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 56408; Mature: 56277
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAALLQRQRVRAPLALITGACGTLAFSPYDFWPAALISLCGLLAVTLNRTSRQAMLLG CCHHHHHHHHHHHCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH FLWGLGLFGSGVNWVYVSIEQFGGMPTPVSVSLVVLLAAYLALYPLLFCAVLNRLWPRTT HHHHHHHHCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VWRLVIAAPALWQATEFLRGWVLTGFPWLQFGYSQLNGPLKGIAPLAGVDTITYLLVIIS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHH GLLVLAVARRRPLASLLALVLLCAPWPLRQIHWYQSLPQKAVNVAMVQGDIAQSMKWDPN HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ALIASLQTYLEATRPYLGKAPIIIWPESAIADTEANEQPFLTMMDRLLRAHHSSLITGLV HHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DERPGSNGMRFYNSVIVLGGETPYQYPARQRYSKHHLVPFGEFVPMEDLLRPLAPFFNLP HCCCCCCCCEEECEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC MSAFSRGSYVQPALRVQGYDLTTAICYEIVLGEQVRANFRPNTDFLLTVSNDAWFGHSIG HHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC PWQHFQMARMRALELGRPLLRATNNGITAAVDASGNVIAHLPQFTRSVLEVNVTPTRGET CHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCCEEECCHHHHHHHHEEECCCCCCCC PYARLGSIPLWLLSALMGALALIYALRRR CHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIAALLQRQRVRAPLALITGACGTLAFSPYDFWPAALISLCGLLAVTLNRTSRQAMLLG CHHHHHHHHHHHCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH FLWGLGLFGSGVNWVYVSIEQFGGMPTPVSVSLVVLLAAYLALYPLLFCAVLNRLWPRTT HHHHHHHHCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VWRLVIAAPALWQATEFLRGWVLTGFPWLQFGYSQLNGPLKGIAPLAGVDTITYLLVIIS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHH GLLVLAVARRRPLASLLALVLLCAPWPLRQIHWYQSLPQKAVNVAMVQGDIAQSMKWDPN HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ALIASLQTYLEATRPYLGKAPIIIWPESAIADTEANEQPFLTMMDRLLRAHHSSLITGLV HHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DERPGSNGMRFYNSVIVLGGETPYQYPARQRYSKHHLVPFGEFVPMEDLLRPLAPFFNLP HCCCCCCCCEEECEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC MSAFSRGSYVQPALRVQGYDLTTAICYEIVLGEQVRANFRPNTDFLLTVSNDAWFGHSIG HHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC PWQHFQMARMRALELGRPLLRATNNGITAAVDASGNVIAHLPQFTRSVLEVNVTPTRGET CHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCCEEECCHHHHHHHHEEECCCCCCCC PYARLGSIPLWLLSALMGALALIYALRRR CHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]