Click here to switch to the map view.

The map label for this gene is yidA [C]

Identifier: 238917540

GI number: 238917540

Start: 1675549

End: 1676355

Strand: Reverse

Name: yidA [C]

Synonym: EUBELI_01619

Alternate gene names: 238917540

Gene position: 1676355-1675549 (Counterclockwise)

Preceding gene: 238917541

Following gene: 238917538

Centisome position: 78.18

GC content: 40.77

Gene sequence:

>807_bases
ATGAAATATAAGGCATTGGCACTGGATTTGGACGGAACATTAACTAATAGAGAGAAGAAAGTTCCAGCGGGCAACAAAGA
AGCGATTGCGAAAGCAATAGATGCAGGCGTTAAGGTTATTCTTGCTTCAGGAAGACCGCTTTTTGGAATAACACCAATAG
CCAGAGAGCTTGAGCTTGACAAGAAAGGCGGTTATATACTGGCATATAATGGCGGTTGTATAGTTGACTGCAAGACGGGA
AAGCAGATGTCTGCGACAATAATGCCACAGGACTGTATAGCAGATATATGCAGTCTTGCAAGAGCCAACGGTGTGTATGC
CCTGACATATGCTGATACGCAGATAGCTGCTGAGAGTGATTCTGATGAATATGTAAAGAAAGAAGCAATATGCAACAGTA
CTACAATCAAGAAAGTAGATGATTTGCGTAAATTTGTGGATTATCCTGTAGAGAAATTTCTGGTTGTAGGAGAGCATGAA
AAGCTTCTTCCTGTGCAGAAAGCCTTGTTAGATAAGCATGAGGGAGTAATCAATGCATTTTTTTCAGAGAGCTATTTCTT
AGAGGTAGTACCTGCAGGAGTTGCAAAGGATGCATCTTTGGATAAGCTGCTCACAATGCTTGATATAACAAGTGAAGAAC
TCGTTGCATGCGGCGATGGAATGAATGATATTCCAATGTTAAAGTATGCGGGGCTTGCAGCGGTTATGGAGAATGCATAT
CCTGAAGTTAAGAAATACGCAAATGTCAACGCACCATCTAACGATGACTGTGGTGTGGCATATGTTATAGATAATTATAT
ATTGTAA

Upstream 100 bases:

>100_bases
ATATATACAACATTTAACATGATGAGAATATCTTAGGTTGAAATCACTGGTGTTATATGCTAAATTGTTCATACATGACT
AAAAGAGGAGATAGAGAAGT

Downstream 100 bases:

>100_bases
TGATGGATTATAAAAATATAACCCCGGCGGTCTTATGGACTGCCGGGGTTATGTTTTATTGATTAATTAGAATTGTTGTT
AAGGCTGTCAACATATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKYKALALDLDGTLTNREKKVPAGNKEAIAKAIDAGVKVILASGRPLFGITPIARELELDKKGGYILAYNGGCIVDCKTG
KQMSATIMPQDCIADICSLARANGVYALTYADTQIAAESDSDEYVKKEAICNSTTIKKVDDLRKFVDYPVEKFLVVGEHE
KLLPVQKALLDKHEGVINAFFSESYFLEVVPAGVAKDASLDKLLTMLDITSEELVACGDGMNDIPMLKYAGLAAVMENAY
PEVKKYANVNAPSNDDCGVAYVIDNYIL

Sequences:

>Translated_268_residues
MKYKALALDLDGTLTNREKKVPAGNKEAIAKAIDAGVKVILASGRPLFGITPIARELELDKKGGYILAYNGGCIVDCKTG
KQMSATIMPQDCIADICSLARANGVYALTYADTQIAAESDSDEYVKKEAICNSTTIKKVDDLRKFVDYPVEKFLVVGEHE
KLLPVQKALLDKHEGVINAFFSESYFLEVVPAGVAKDASLDKLLTMLDITSEELVACGDGMNDIPMLKYAGLAAVMENAY
PEVKKYANVNAPSNDDCGVAYVIDNYIL
>Mature_268_residues
MKYKALALDLDGTLTNREKKVPAGNKEAIAKAIDAGVKVILASGRPLFGITPIARELELDKKGGYILAYNGGCIVDCKTG
KQMSATIMPQDCIADICSLARANGVYALTYADTQIAAESDSDEYVKKEAICNSTTIKKVDDLRKFVDYPVEKFLVVGEHE
KLLPVQKALLDKHEGVINAFFSESYFLEVVPAGVAKDASLDKLLTMLDITSEELVACGDGMNDIPMLKYAGLAAVMENAY
PEVKKYANVNAPSNDDCGVAYVIDNYIL

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=274, Percent_Identity=30.2919708029197, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786982, Length=289, Percent_Identity=24.9134948096886, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI48994981, Length=249, Percent_Identity=26.1044176706827, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI87081790, Length=286, Percent_Identity=27.972027972028, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081741, Length=244, Percent_Identity=26.2295081967213, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29034; Mature: 29034

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKALALDLDGTLTNREKKVPAGNKEAIAKAIDAGVKVILASGRPLFGITPIARELELD
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEECCCHHHHHEEC
KKGGYILAYNGGCIVDCKTGKQMSATIMPQDCIADICSLARANGVYALTYADTQIAAESD
CCCCEEEEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCC
SDEYVKKEAICNSTTIKKVDDLRKFVDYPVEKFLVVGEHEKLLPVQKALLDKHEGVINAF
CHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCHHHHHH
FSESYFLEVVPAGVAKDASLDKLLTMLDITSEELVACGDGMNDIPMLKYAGLAAVMENAY
HCCCEEEEEECCCCCCCCHHHHHHHHHHCCHHHHEECCCCCCCCCHHHHHHHHHHHHHCC
PEVKKYANVNAPSNDDCGVAYVIDNYIL
HHHHHHCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKYKALALDLDGTLTNREKKVPAGNKEAIAKAIDAGVKVILASGRPLFGITPIARELELD
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEECCCHHHHHEEC
KKGGYILAYNGGCIVDCKTGKQMSATIMPQDCIADICSLARANGVYALTYADTQIAAESD
CCCCEEEEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCC
SDEYVKKEAICNSTTIKKVDDLRKFVDYPVEKFLVVGEHEKLLPVQKALLDKHEGVINAF
CHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCHHHHHH
FSESYFLEVVPAGVAKDASLDKLLTMLDITSEELVACGDGMNDIPMLKYAGLAAVMENAY
HCCCEEEEEECCCCCCCCHHHHHHHHHHCCHHHHEECCCCCCCCCHHHHHHHHHHHHHCC
PEVKKYANVNAPSNDDCGVAYVIDNYIL
HHHHHHCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA