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The map label for this gene is lsrF [H]

Identifier: 238896599

GI number: 238896599

Start: 4580272

End: 4581159

Strand: Reverse

Name: lsrF [H]

Synonym: KP1_4800

Alternate gene names: 238896599

Gene position: 4581159-4580272 (Counterclockwise)

Preceding gene: 238896600

Following gene: 238896598

Centisome position: 87.28

GC content: 60.25

Gene sequence:

>888_bases
ATGGCAGATTTAGACGATATCAAAGAGGGGAAGGACTTCGGTATTGACCGCCCGCAGCAGAATACGCTGTATACCCTGAA
AGGCTGCGGCTCGCTGGACTGGGGCATGCAGTCGCGGCTGGCGCGCATTTTTAATCCGCACAGCAACCGCACGGTGATGC
TGGCCTTCGATCACGGCTACTTCCAGGGGCCAACCACCGGGCTGGAGCGTATCGACCTGTCGATTGCGCCGCTGTTTGCC
GACACCGACGTGCTGATGTGCACCCGCGGCGTACTGCGCAGCCAGGTACCGGCGGCCACCAATAAGCCGGTGGTGCTCCG
CGCCTCCGGCGGCAATTCGATTTTGAGCGAACTCTCCAACGAATGCGTGGCGGTGGCGATGGAAGACGCGCTGCGGCTCA
ACGTATGCGCGGTGGCGGCGCAGGTCTATATCGGCAGCGAATACGAACATCAGTCGATCAATAACATCATCAAACTGGTG
GACGCCGGCAATCGCTACGGTATGCCGGTCCTGGCGGTTACCGGCGTCGGCAAAGAGATGACCCGCGATGCGCGCTACTT
CTCGCTGGCCAGCCGGATTGCCGCCGAAATGGGGGCGCAGTTTGTGAAGACCTATTTCGTTGAGGAAGGCTTTGAAAAAG
TGACCGCCAGCTGTCCGGTGCCGATCGTTATCGCCGGCGGTAAAAAACTGCCGGAGCATGAGGCGCTGGAGATGTGCTGG
CGGGCGATCGACCAGGGGGCGTCCGGGGTGGATATGGGGCGCAATATCTTCCAGTCCAGCGCCCCGCGCGCGATGCTGAA
GGCGGTGAAAAAGGTGGTGCATGAGAATCTGAACGCGCGCGAAGCGTATCAGTTCTGGCAGGAAGAGAAACAGGGAGAGC
TGAAATGA

Upstream 100 bases:

>100_bases
ACAAGTATGAGGCGAAGGGCAACGGTATCGTGCTGCTGCCGGAGCGCGTGGTGTTCAGCAAAGAGAACATCAACAACTAC
GACTTCTGACGGAGGATGAG

Downstream 100 bases:

>100_bases
ACGTCACGCTAGTGGAGATCAATATTAAACCCGAGCGGGTGGATGAGTTTCTCGAGGTGTTTCGCGCCAACCACGAGGGC
GCGCTGCGGGAGCCAGGCAA

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGYFQGPTTGLERIDLSIAPLFA
DTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSNECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLV
DAGNRYGMPVLAVTGVGKEMTRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCW
RAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK

Sequences:

>Translated_295_residues
MADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGYFQGPTTGLERIDLSIAPLFA
DTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSNECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLV
DAGNRYGMPVLAVTGVGKEMTRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCW
RAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK
>Mature_294_residues
ADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGYFQGPTTGLERIDLSIAPLFAD
TDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSNECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLVD
AGNRYGMPVLAVTGVGKEMTRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCWR
AIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK

Specific function: Could be involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle [H]

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=291, Percent_Identity=76.6323024054983, Blast_Score=481, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 32411; Mature: 32280

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGY
CCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC
FQGPTTGLERIDLSIAPLFADTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSN
CCCCCCCHHHHCCEEECEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHH
ECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLVDAGNRYGMPVLAVTGVGKEM
HHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH
TRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
RAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK
HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGY
CCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC
FQGPTTGLERIDLSIAPLFADTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSN
CCCCCCCHHHHCCEEECEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHH
ECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLVDAGNRYGMPVLAVTGVGKEM
HHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH
TRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
RAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK
HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA