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The map label for this gene is ganQ [H]

Identifier: 238893417

GI number: 238893417

Start: 1256994

End: 1257845

Strand: Direct

Name: ganQ [H]

Synonym: KP1_1304

Alternate gene names: 238893417

Gene position: 1256994-1257845 (Clockwise)

Preceding gene: 238893416

Following gene: 238893418

Centisome position: 23.95

GC content: 55.4

Gene sequence:

>852_bases
ATGGCTCAATCACCCAGTATTAAACGCGAAAAGTGGATCCGGCTCTCTCTCACCTGGCTGGTGGTTATTCTGGTCTCAGT
GGTGATTATCTATCCGCTGGTCTGGACGGTCGGGGCGTCGCTGAACGCCGGCAATAGCCTGCTCAGTACCTCAATCATTC
CGGAAAATGTGTCGTTCCAGCACTATGCCGATCTGTTCAATGGCAATGTGAATTACCTCACCTGGTACTGGAACTCGATG
AAAATCAGCTTCCTGACCATGGTGCTGACCCTGATTAGCGTTAGCTTTACCGCTTACGCCTTCTCCCGCTTCCGCTTTAA
AGGGCGGCAGAACGGGCTGATGTTGTTCCTGCTGCTGCAGATGATCCCGCAGTTTTCCGCGCTGATTGCCATCTTTGTGC
TGTCGCAACTGCTTGGCCTGATAAACAGCCACCTGGCGCTGGTGCTGATCTACGTCGGGGGAATGATCCCGATGAATACC
TGGCTGATGAAAGGGTATCTCGACGCGATCCCTAAAGACCTGGATGAGTCCGCTCGCATGGACGGCGCCAGCAGCTTTCG
CATCTTTATCGAGATCATCATGCCGTTGTCGAGGCCCATCCTCGCGGTGGTGGCGCTGTTCTCGTTCACTGGGCCGCTGG
GGGATTTCATCCTCTCCAGCACCATCCTGCGCACCCCGGATAAATACACGCTGCCTATCGGTCTGTATAACCTGGTGGCG
CAAAAAATGGGTGCCAGCTACACCACCTACGCGGCGGGGGCGGTGCTGATCGCCGTACCGGTGGCGATCCTCTACCTGGC
GCTACAAAAATACTTCGTCTCCGGCCTGACCTCGGGCAGTACTAAAGGATAA

Upstream 100 bases:

>100_bases
ATCACGATCCTGCTGTCGATCTTTGTCGTCGGCCTGGCGCTGTGGCAGTTCCGCGCCACCAAATCCTTCAAAAATGACGA
CATGGCGTAAGGGAAGCAAC

Downstream 100 bases:

>100_bases
GCACATGAAAAGATTCACACCCGCATGGCTTGCGGTTTGTCTGGCATGCAGTTTCTCCACCTCTTCTCTGGCCGCGGACG
CGCTTGCAACCCGCGCGTTT

Product: putative binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MAQSPSIKREKWIRLSLTWLVVILVSVVIIYPLVWTVGASLNAGNSLLSTSIIPENVSFQHYADLFNGNVNYLTWYWNSM
KISFLTMVLTLISVSFTAYAFSRFRFKGRQNGLMLFLLLQMIPQFSALIAIFVLSQLLGLINSHLALVLIYVGGMIPMNT
WLMKGYLDAIPKDLDESARMDGASSFRIFIEIIMPLSRPILAVVALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVA
QKMGASYTTYAAGAVLIAVPVAILYLALQKYFVSGLTSGSTKG

Sequences:

>Translated_283_residues
MAQSPSIKREKWIRLSLTWLVVILVSVVIIYPLVWTVGASLNAGNSLLSTSIIPENVSFQHYADLFNGNVNYLTWYWNSM
KISFLTMVLTLISVSFTAYAFSRFRFKGRQNGLMLFLLLQMIPQFSALIAIFVLSQLLGLINSHLALVLIYVGGMIPMNT
WLMKGYLDAIPKDLDESARMDGASSFRIFIEIIMPLSRPILAVVALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVA
QKMGASYTTYAAGAVLIAVPVAILYLALQKYFVSGLTSGSTKG
>Mature_282_residues
AQSPSIKREKWIRLSLTWLVVILVSVVIIYPLVWTVGASLNAGNSLLSTSIIPENVSFQHYADLFNGNVNYLTWYWNSMK
ISFLTMVLTLISVSFTAYAFSRFRFKGRQNGLMLFLLLQMIPQFSALIAIFVLSQLLGLINSHLALVLIYVGGMIPMNTW
LMKGYLDAIPKDLDESARMDGASSFRIFIEIIMPLSRPILAVVALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVAQ
KMGASYTTYAAGAVLIAVPVAILYLALQKYFVSGLTSGSTKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=294, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=27.3076923076923, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789860, Length=210, Percent_Identity=26.1904761904762, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31321; Mature: 31189

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSPSIKREKWIRLSLTWLVVILVSVVIIYPLVWTVGASLNAGNSLLSTSIIPENVSFQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHH
HYADLFNGNVNYLTWYWNSMKISFLTMVLTLISVSFTAYAFSRFRFKGRQNGLMLFLLLQ
HHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
MIPQFSALIAIFVLSQLLGLINSHLALVLIYVGGMIPMNTWLMKGYLDAIPKDLDESARM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHCC
DGASSFRIFIEIIMPLSRPILAVVALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVA
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECHHHHHHHH
QKMGASYTTYAAGAVLIAVPVAILYLALQKYFVSGLTSGSTKG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AQSPSIKREKWIRLSLTWLVVILVSVVIIYPLVWTVGASLNAGNSLLSTSIIPENVSFQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHH
HYADLFNGNVNYLTWYWNSMKISFLTMVLTLISVSFTAYAFSRFRFKGRQNGLMLFLLLQ
HHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
MIPQFSALIAIFVLSQLLGLINSHLALVLIYVGGMIPMNTWLMKGYLDAIPKDLDESARM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHCC
DGASSFRIFIEIIMPLSRPILAVVALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVA
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECHHHHHHHH
QKMGASYTTYAAGAVLIAVPVAILYLALQKYFVSGLTSGSTKG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]