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The map label for this gene is 238893418

Identifier: 238893418

GI number: 238893418

Start: 1257850

End: 1259052

Strand: Direct

Name: 238893418

Synonym: KP1_1305

Alternate gene names: NA

Gene position: 1257850-1259052 (Clockwise)

Preceding gene: 238893417

Following gene: 238893419

Centisome position: 23.97

GC content: 55.28

Gene sequence:

>1203_bases
ATGAAAAGATTCACACCCGCATGGCTTGCGGTTTGTCTGGCATGCAGTTTCTCCACCTCTTCTCTGGCCGCGGACGCGCT
TGCAACCCGCGCGTTTCAGGGCATGCCGGCGGACTTTATCAAAGGAGCGGATATCTCCACGCTGCTGGACGCCGAAAAGC
ACGGGGCGACGTTCTACGATCAGAATAATCAGCGCAAGGATCCGATCGCTATTCTGAAAGAGAACGGCGTCAACTATGTC
CGCCTCCGTCTGTGGGTGGATCCGCAATCGGCGAGCGGCGAGGACTATGGCGGTGGGAACAATGATCTGGCCACCACCCT
GGCGCTGGCGAAACGGGCGAAAGCCCAGGGGATGAAGCTGTTGCTTGATTTTCACTACAGCGATTTCTGGACCGATCCCG
GCAAGCAGTTCAAGCCGAAAGCCTGGGAAAAGCTGGATTACCCGCAGCTGAAAACGGCGATTCATGACTATACCCGCGAT
ACCATCGCCCGCTTTAAGCAGGCGGGCGTGCTGCCGGATATGGTGCAGATCGGCAACGAAATCAACGGCGGCATCCTGTG
GCCGGAAGGGAAAAGCTGGGGGCAGGGCGGCGGAGAGTTCGACCGGCTGGCTGGCCTGCTGAACGCGGCTATCGCTGGCC
TGAAGGAGAACCTGCGCCAGGGCGAGCAGGTGAAAATCATGCTGCATCTGGCCGAAGGGACCAAGAACGATACCTTCCGC
TGGTGGTTTGATGAGATCGACAAGCGCCATGTACCGTATGACATGATTGGTCTGTCGATGTACACCTACTGGAATGGCCC
GATCAGCGCCCTGAAGGCCAATATGGATGACATCAGCAAACGCTATAACAAAGACGTCATCGTCGTCGAGGCGGCCTATG
CCTATACCCTGGCCAACTGCGATAACGCGGAAAATAGTTTCCAGGCGAAAGAGGAAAAGGATGGGGGATATCCCGCCAGC
GTACAGGGGCAATATAACTATATTCACGATTTAATGCAGGCGGTGGTTGATGTGCCAGACCAGCGTGGCAAAGGTATTTT
CTATTGGGAGCCTACATGGATTGCCGTGCCGGGAAATACCTGGGCCACCCCGGCGGGGATGAAATATATCCACGACGAGT
GGAAAGAGGGTAATGCACGTGAAAATCAGGCGCTATTTGATTGCCAGGGAAAAGTATTGCCGTCGGTAAAAGTTTTTAAT
TAA

Upstream 100 bases:

>100_bases
GGGGCGGTGCTGATCGCCGTACCGGTGGCGATCCTCTACCTGGCGCTACAAAAATACTTCGTCTCCGGCCTGACCTCGGG
CAGTACTAAAGGATAAGCAC

Downstream 100 bases:

>100_bases
TTTTTTTGTCGTCTTTTTCAGGAAGTTTATTATGAATAAATTTGCACCTTTACATCCGAAGGTTAGTACGCTGCTGCATG
GCGCGGATTATAATCCGGAG

Product: putative galactosidase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYDQNNQRKDPIAILKENGVNYV
RLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKLLLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRD
TIARFKQAGVLPDMVQIGNEINGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
WWFDEIDKRHVPYDMIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANCDNAENSFQAKEEKDGGYPAS
VQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNTWATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN

Sequences:

>Translated_400_residues
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYDQNNQRKDPIAILKENGVNYV
RLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKLLLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRD
TIARFKQAGVLPDMVQIGNEINGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
WWFDEIDKRHVPYDMIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANCDNAENSFQAKEEKDGGYPAS
VQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNTWATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN
>Mature_400_residues
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYDQNNQRKDPIAILKENGVNYV
RLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKLLLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRD
TIARFKQAGVLPDMVQIGNEINGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
WWFDEIDKRHVPYDMIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANCDNAENSFQAKEEKDGGYPAS
VQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNTWATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: NA

Molecular weight: Translated: 44819; Mature: 44819

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYD
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCEEEC
QNNQRKDPIAILKENGVNYVRLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKL
CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
LLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRDTIARFKQAGVLPDMVQIGNE
EEEECCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
INGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEE
WWFDEIDKRHVPYDMIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANC
EHHHHHCCCCCCHHHHHEEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEEEHHEEEECCC
DNAENSFQAKEEKDGGYPASVQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNT
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCC
WATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN
CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECC
>Mature Secondary Structure
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYD
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCEEEC
QNNQRKDPIAILKENGVNYVRLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKL
CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
LLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRDTIARFKQAGVLPDMVQIGNE
EEEECCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
INGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEE
WWFDEIDKRHVPYDMIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANC
EHHHHHCCCCCCHHHHHEEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEEEHHEEEECCC
DNAENSFQAKEEKDGGYPASVQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNT
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCC
WATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN
CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA