Click here to switch to the map view.

The map label for this gene is yjjA [H]

Identifier: 238892943

GI number: 238892943

Start: 753357

End: 753860

Strand: Reverse

Name: yjjA [H]

Synonym: KP1_0769

Alternate gene names: 238892943

Gene position: 753860-753357 (Counterclockwise)

Preceding gene: 238892944

Following gene: 238892942

Centisome position: 14.36

GC content: 55.56

Gene sequence:

>504_bases
ATGAGTCCGTCTATGAAATCGTTTAAAAATAGCGTTATTGCCGCGCTTGCCGTTAGCGCGTTTACCCTCTCTGGCGCCCA
CGCCGCCTCCTGGCAGGATTCCCTTAACAGCGCTGCCAGCCAGCTCAGCGGCAGTAACGCCCAGGCCAGCGGCGGCATGT
CCGTCTCCTCGCTAACCAGCCTGCTCAACGGCAGCAGCCAATCCCTGACCGCCAGCAGCATGAATAATGCGGCCGGGATA
CTGTCATATTGCGCGAAACAGAAGCTGGCCTCCGTGACCAGCGCCGATAACGTCAAAAATCAGGTGCTGGATAAACTGGG
GCTTAGCACGCCGGAAAAACAAAAACAGGACACCAGCTATCTGGATGGCCTGCAGGGGCTGCTCAACAGCAAAAACGGCC
AGCAGTTGGACCTGAATACGCTCGGCAATAGCTCGCTGGCGAAACAGGTAAAAACCAAAGCCTGCGATCTGGTCTTAAAA
CAGGGTGTTAATTTCCTCTCCTGA

Upstream 100 bases:

>100_bases
TCAATTGGGAAAGTTACCGGCACCGCGTTACAGGCAAGGAGTATTAAGAGATTTCCGGGCGACGACGGCGTTATACTAAA
GCGATTATTCAGTCACGCTT

Downstream 100 bases:

>100_bases
TCCTGACTGACAAGGCCGCATTTGTTGCCTTCGCGGCGGCGCCGCGGCCTGAAACGCTTTTTTTGCAGTTTTCCTGTTCC
GTTTTCCCATTTCGCACGAT

Product: putative outer membrane protein

Products: NA

Alternate protein names: Protein P-18 [H]

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSPSMKSFKNSVIAALAVSAFTLSGAHAASWQDSLNSAASQLSGSNAQASGGMSVSSLTSLLNGSSQSLTASSMNNAAGI
LSYCAKQKLASVTSADNVKNQVLDKLGLSTPEKQKQDTSYLDGLQGLLNSKNGQQLDLNTLGNSSLAKQVKTKACDLVLK
QGVNFLS

Sequences:

>Translated_167_residues
MSPSMKSFKNSVIAALAVSAFTLSGAHAASWQDSLNSAASQLSGSNAQASGGMSVSSLTSLLNGSSQSLTASSMNNAAGI
LSYCAKQKLASVTSADNVKNQVLDKLGLSTPEKQKQDTSYLDGLQGLLNSKNGQQLDLNTLGNSSLAKQVKTKACDLVLK
QGVNFLS
>Mature_166_residues
SPSMKSFKNSVIAALAVSAFTLSGAHAASWQDSLNSAASQLSGSNAQASGGMSVSSLTSLLNGSSQSLTASSMNNAAGIL
SYCAKQKLASVTSADNVKNQVLDKLGLSTPEKQKQDTSYLDGLQGLLNSKNGQQLDLNTLGNSSLAKQVKTKACDLVLKQ
GVNFLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082434, Length=164, Percent_Identity=60.9756097560976, Blast_Score=197, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019637 [H]

Pfam domain/function: PF10696 DUF2501 [H]

EC number: NA

Molecular weight: Translated: 17162; Mature: 17031

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSMKSFKNSVIAALAVSAFTLSGAHAASWQDSLNSAASQLSGSNAQASGGMSVSSLTS
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
LLNGSSQSLTASSMNNAAGILSYCAKQKLASVTSADNVKNQVLDKLGLSTPEKQKQDTSY
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LDGLQGLLNSKNGQQLDLNTLGNSSLAKQVKTKACDLVLKQGVNFLS
HHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SPSMKSFKNSVIAALAVSAFTLSGAHAASWQDSLNSAASQLSGSNAQASGGMSVSSLTS
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
LLNGSSQSLTASSMNNAAGILSYCAKQKLASVTSADNVKNQVLDKLGLSTPEKQKQDTSY
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LDGLQGLLNSKNGQQLDLNTLGNSSLAKQVKTKACDLVLKQGVNFLS
HHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2844800; 7610040; 9278503 [H]