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The map label for this gene is sorB [H]

Identifier: 238892936

GI number: 238892936

Start: 745479

End: 745949

Strand: Direct

Name: sorB [H]

Synonym: KP1_0761

Alternate gene names: 238892936

Gene position: 745479-745949 (Clockwise)

Preceding gene: 238892935

Following gene: 238892937

Centisome position: 14.2

GC content: 44.59

Gene sequence:

>471_bases
ATGATTACATTATTAAGGGTAGACCATCGATTACTTCACGGCCAGGTGGCCTTTTCCTGGACCCAATATGTCGGCGCCGA
TTGTATTTTAATCGCCAACGATAGCGTCCCTGGCGATGAGTTGCGGAAAACCACCATTAAGCTTGCCAAACCGCCCTCGG
TGAAGCTGGTGATTAAAAATATAAATGATTCTATTGAGGCAATAAAAAGCGGGGTTACCGATAAATATAATTTATTTATT
GTTGTGGAGTCGGTTAATGACGCCTGGCGTATTGCCAGCGCCATCGACGAAATAAAAAGCATAAATCTTGGCGGAATAAA
GGCTAAAGAGGGCAGTAAAAATATCTCTAAGGCGATTAATTTACTGCCGACAGAAATAGAACAGCTACAACAACTGGTGG
GCAAGGGCGTCGAAGTGGAGATTCGCCAGGTCCCGAACGATCGCAAACAGCTTTTTGCGGAATGCGTGTAA

Upstream 100 bases:

>100_bases
CCGAGGCATTAACAAACGCCAAAGAGAGCATTCAGTACTGCAATCAAACGATTGCCAGCGCGATGACTATGGATAAAGAC
TTCTGAAATGAGGAAGCATG

Downstream 100 bases:

>100_bases
TTCCGGAGGACAGATTATGGTAGAGGCTCTCTTACTGGGTCTGGTGGCGTTTATCGCGCAATCGGAATATGCCTTAGGGA
CGTCGCTAATTTCACGGCCT

Product: putative PTS permease

Products: NA

Alternate protein names: EIIB-Sor; EIII-B-Sor; PTS system sorbose-specific EIIB component [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MITLLRVDHRLLHGQVAFSWTQYVGADCILIANDSVPGDELRKTTIKLAKPPSVKLVIKNINDSIEAIKSGVTDKYNLFI
VVESVNDAWRIASAIDEIKSINLGGIKAKEGSKNISKAINLLPTEIEQLQQLVGKGVEVEIRQVPNDRKQLFAECV

Sequences:

>Translated_156_residues
MITLLRVDHRLLHGQVAFSWTQYVGADCILIANDSVPGDELRKTTIKLAKPPSVKLVIKNINDSIEAIKSGVTDKYNLFI
VVESVNDAWRIASAIDEIKSINLGGIKAKEGSKNISKAINLLPTEIEQLQQLVGKGVEVEIRQVPNDRKQLFAECV
>Mature_156_residues
MITLLRVDHRLLHGQVAFSWTQYVGADCILIANDSVPGDELRKTTIKLAKPPSVKLVIKNINDSIEAIKSGVTDKYNLFI
VVESVNDAWRIASAIDEIKSINLGGIKAKEGSKNISKAINLLPTEIEQLQQLVGKGVEVEIRQVPNDRKQLFAECV

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788120, Length=149, Percent_Identity=28.8590604026846, Blast_Score=83, Evalue=8e-18,
Organism=Escherichia coli, GI87082217, Length=146, Percent_Identity=25.3424657534247, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 17232; Mature: 17232

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLLRVDHRLLHGQVAFSWTQYVGADCILIANDSVPGDELRKTTIKLAKPPSVKLVIKN
CEEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHEECCCCCEEEEEEC
INDSIEAIKSGVTDKYNLFIVVESVNDAWRIASAIDEIKSINLGGIKAKEGSKNISKAIN
CCHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHH
LLPTEIEQLQQLVGKGVEVEIRQVPNDRKQLFAECV
HCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC
>Mature Secondary Structure
MITLLRVDHRLLHGQVAFSWTQYVGADCILIANDSVPGDELRKTTIKLAKPPSVKLVIKN
CEEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHEECCCCCEEEEEEC
INDSIEAIKSGVTDKYNLFIVVESVNDAWRIASAIDEIKSINLGGIKAKEGSKNISKAIN
CCHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHH
LLPTEIEQLQQLVGKGVEVEIRQVPNDRKQLFAECV
HCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]