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The map label for this gene is agaC [H]

Identifier: 238892937

GI number: 238892937

Start: 745966

End: 746745

Strand: Direct

Name: agaC [H]

Synonym: KP1_0762

Alternate gene names: 238892937

Gene position: 745966-746745 (Clockwise)

Preceding gene: 238892936

Following gene: 238892938

Centisome position: 14.21

GC content: 56.92

Gene sequence:

>780_bases
ATGGTAGAGGCTCTCTTACTGGGTCTGGTGGCGTTTATCGCGCAATCGGAATATGCCTTAGGGACGTCGCTAATTTCACG
GCCTATCGTCACCGGGCTGTTGACCGGGCTGGTGCTGGGGGATGTACAGACCGGCGTCATTATGGGCGCGACGCTGGAGC
TGGCGTTTATCGGCTCTTTCTCCGTTGGCGCCTCGATCCCACCCGACGTCGTGACCGGCGGTATTCTCGGCGTGGCGTTC
GCCATTACCTCTGGCGCAGGCACAGAAACGGCGTTGCTGCTTGGCCTGCCTATCGCCACGCTGACTTTGATCCTGAAAAA
TATCTATCTGGGGATGTTCATTCCAATGCTTAGCCAAAAGGCGGACGGGTATGCGGAACGGGCGGATCTCCGCGGCATTG
AGCGGATGCATTTGATTGCCGGATTCGGCCTGTCGCTGATGCTTGCCGCGGTGGTCACCGTCTCATTCCTGGTGGGCAGC
AACGCGGTGAAATCCCTGCTCGATACGATCCCGGAATTTATCAAACATGGGCTCAGCGTCGCCACCGGCATCATCCCGGC
CCTCGGCTTCGCGATGCTCGCCAGGCTGCTGATTAACAAGAAAGTGGCGCCGTATTTTTTCCTCGGTTTTGTGCTGATGG
CCTATTTGAAAATCCCGGTGACCGGTATCGCCATTCTCGGCGCTATCGTGGCGGTGGTCATGGTTAACGTCACCGCGTTG
AATTCACCTCGTATCACGACAGAACAAGGAGTCAGCGATGACGACGAAGATGATTTCTGA

Upstream 100 bases:

>100_bases
CAACAACTGGTGGGCAAGGGCGTCGAAGTGGAGATTCGCCAGGTCCCGAACGATCGCAAACAGCTTTTTGCGGAATGCGT
GTAATTCCGGAGGACAGATT

Downstream 100 bases:

>100_bases
AGAGACCCTGCAGCCGCAGGCGCAGGAAGAAACCCGGATTACGCCGCGCGATTTACGCCGGGTGTTCTGGCGCTCTTTCC
AGATGGAGTTCTCGTGGAAC

Product: putative PTS permease

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSFSVGASIPPDVVTGGILGVAF
AITSGAGTETALLLGLPIATLTLILKNIYLGMFIPMLSQKADGYAERADLRGIERMHLIAGFGLSLMLAAVVTVSFLVGS
NAVKSLLDTIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNVTAL
NSPRITTEQGVSDDDEDDF

Sequences:

>Translated_259_residues
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSFSVGASIPPDVVTGGILGVAF
AITSGAGTETALLLGLPIATLTLILKNIYLGMFIPMLSQKADGYAERADLRGIERMHLIAGFGLSLMLAAVVTVSFLVGS
NAVKSLLDTIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNVTAL
NSPRITTEQGVSDDDEDDF
>Mature_259_residues
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSFSVGASIPPDVVTGGILGVAF
AITSGAGTETALLLGLPIATLTLILKNIYLGMFIPMLSQKADGYAERADLRGIERMHLIAGFGLSLMLAAVVTVSFLVGS
NAVKSLLDTIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNVTAL
NSPRITTEQGVSDDDEDDF

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=260, Percent_Identity=28.8461538461538, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1788121, Length=267, Percent_Identity=29.5880149812734, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 26909; Mature: 26909

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSF
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
SVGASIPPDVVTGGILGVAFAITSGAGTETALLLGLPIATLTLILKNIYLGMFIPMLSQK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGYAERADLRGIERMHLIAGFGLSLMLAAVVTVSFLVGSNAVKSLLDTIPEFIKHGLSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNVTAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
NSPRITTEQGVSDDDEDDF
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSF
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
SVGASIPPDVVTGGILGVAFAITSGAGTETALLLGLPIATLTLILKNIYLGMFIPMLSQK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGYAERADLRGIERMHLIAGFGLSLMLAAVVTVSFLVGSNAVKSLLDTIPEFIKHGLSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNVTAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
NSPRITTEQGVSDDDEDDF
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]