| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is lpxD [C]
Identifier: 238892498
GI number: 238892498
Start: 283120
End: 283725
Strand: Reverse
Name: lpxD [C]
Synonym: KP1_0265
Alternate gene names: 238892498
Gene position: 283725-283120 (Counterclockwise)
Preceding gene: 238892499
Following gene: 238892496
Centisome position: 5.41
GC content: 57.59
Gene sequence:
>606_bases TTGGCTGTGGCTGGAAGTACTCGCCGCGAATCCCGCCGCGCGCCGTTTTTACGAACGCCAGGGAATGCAGCACATCAGAG ACACGACTTTCCACTCCGCCAGCCAGCAAAGCACCTTACATATTCTGGCCAAACCTATTTGAGAGGAACTATGCCTGAGC TTCGTGATACCGGTGTACGTAACGTCGTTTGTGGGGAAAATGTCGTTATTTACCAGCCCGCCAACCTCTATGATTGCCAG CTCGGCGATAACGTCTTCGTCGGGCCGTTCGTTGAGATCCAGGGGAATACCCGCATCGGCGCGAACAGTAAAATTCAATC CCATACCTTTATCTGCGAGTACGTCACCATCGGCCAGCGCTGCTTTATCGGTCACGGCGTGATGTTTGCCAACGACCTGT TTCGCGAGGGTAAACCAAACGCCGACCGCGCCAGCTGGGGGCGGATCGAGATTGGCGATGACGTGTCGATCGGCAGCGGC GCCACGATTCTGGCCGTCAGCATCTGCGATGGGGTGGTGATAGGCGCGGGCAGCGTGGTAACGAAGTCCATTACCGAGAA AGGCGTGTGGGCGGGGAATCCGGCGAGGCTGCTGCGGCGGCTATAA
Upstream 100 bases:
>100_bases GCTGCTGCATAAGCTCTACCTGATGCCGGGGAAGACTGGCCACCGCTACGGCGAGCATATTTTTCACGCCGTCGAGGCGA GCAAAAACGGCCGGTGAAAG
Downstream 100 bases:
>100_bases ATAAAAATGCCGACCAAAGGGTCGGCATTCCGTCTTAGCTGCGCAAGCGTTATGCGCGCCAGGCTTTATAACGGTTAATC AGGCCGTTAGTAGAGCTGTC
Product: UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase
Products: UDP-2,3-Bis(3-Hydroxytetradecanoyl)Glucosamine; [Acyl-Carrier Protein]. [C]
Alternate protein names: Hexapaptide Repeat-Containing Transferase; Transferase Hexapeptide Repeat Containing Protein; UDP-3-O-(3-Hydroxymyristoyl)-Glucosamine N-Acyltransferase; Acyltransferase; Acetyltransferase Protein; Hexapeptide Repeat-Containing Acetyltransferase; Hexapeptide Repeat Acetyltransferase; Acetyl/Acyl Transferase Related Protein
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAVAGSTRRESRRAPFLRTPGNAAHQRHDFPLRQPAKHLTYSGQTYLRGTMPELRDTGVRNVVCGENVVIYQPANLYDCQ LGDNVFVGPFVEIQGNTRIGANSKIQSHTFICEYVTIGQRCFIGHGVMFANDLFREGKPNADRASWGRIEIGDDVSIGSG ATILAVSICDGVVIGAGSVVTKSITEKGVWAGNPARLLRRL
Sequences:
>Translated_201_residues MAVAGSTRRESRRAPFLRTPGNAAHQRHDFPLRQPAKHLTYSGQTYLRGTMPELRDTGVRNVVCGENVVIYQPANLYDCQ LGDNVFVGPFVEIQGNTRIGANSKIQSHTFICEYVTIGQRCFIGHGVMFANDLFREGKPNADRASWGRIEIGDDVSIGSG ATILAVSICDGVVIGAGSVVTKSITEKGVWAGNPARLLRRL >Mature_200_residues AVAGSTRRESRRAPFLRTPGNAAHQRHDFPLRQPAKHLTYSGQTYLRGTMPELRDTGVRNVVCGENVVIYQPANLYDCQL GDNVFVGPFVEIQGNTRIGANSKIQSHTFICEYVTIGQRCFIGHGVMFANDLFREGKPNADRASWGRIEIGDDVSIGSGA TILAVSICDGVVIGAGSVVTKSITEKGVWAGNPARLLRRL
Specific function: Lipid A biosynthesis; third step. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 21887; Mature: 21756
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAGSTRRESRRAPFLRTPGNAAHQRHDFPLRQPAKHLTYSGQTYLRGTMPELRDTGVR CCCCCCCCHHHHCCCEEECCCCCHHHCCCCCCCCCHHHCEECCCEEEECCCCHHHHCCCC NVVCGENVVIYQPANLYDCQLGDNVFVGPFVEIQGNTRIGANSKIQSHTFICEYVTIGQR EEEECCCEEEECCCCEEEEECCCCEEECCEEEECCCEEECCCCCCCCCEEEEEEEECCCE CFIGHGVMFANDLFREGKPNADRASWGRIEIGDDVSIGSGATILAVSICDGVVIGAGSVV EEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEECCCHHH TKSITEKGVWAGNPARLLRRL HHHHHHCCCCCCCHHHHHHCC >Mature Secondary Structure AVAGSTRRESRRAPFLRTPGNAAHQRHDFPLRQPAKHLTYSGQTYLRGTMPELRDTGVR CCCCCCCHHHHCCCEEECCCCCHHHCCCCCCCCCHHHCEECCCEEEECCCCHHHHCCCC NVVCGENVVIYQPANLYDCQLGDNVFVGPFVEIQGNTRIGANSKIQSHTFICEYVTIGQR EEEECCCEEEECCCCEEEEECCCCEEECCEEEECCCEEECCCCCCCCCEEEEEEEECCCE CFIGHGVMFANDLFREGKPNADRASWGRIEIGDDVSIGSGATILAVSICDGVVIGAGSVV EEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEECCCHHH TKSITEKGVWAGNPARLLRRL HHHHHHCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-3-O-(3-Hydroxytetradecanoyl)Glucosamine; (R)-3-Hydroxytetradecanoyl-[Acyl-Carrier Protein] [C]
Specific reaction: UDP-3-O-(3-Hydroxytetradecanoyl)Glucosamine + (R)-3-Hydroxytetradecanoyl-[Acyl-Carrier Protein] = UDP-2,3-Bis(3-Hydroxytetradecanoyl)Glucosamine + [Acyl-Carrier Protein]. [C]
General reaction: Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA